---
source: src/gnomad_pbs/gnomad3.rs
assertion_line: 422
expression: records
---
- chrom: chr1
  pos: 15971
  ref_allele: G
  alt_allele: C
  filters: []
  vep:
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000450305
      feature_biotype: transcribed_unprocessed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "2301"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000456328
      feature_biotype: processed_transcript
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1562"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: 1
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: ENSG00000227232
      feature_type: Transcript
      feature: ENST00000488147
      feature_biotype: unprocessed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "ENST00000488147.1:n.1068-24C>G"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: ENSG00000278267
      feature_type: Transcript
      feature: ENST00000619216
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1398"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: "653635"
      feature_type: Transcript
      feature: NR_024540.1
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "NR_024540.1:n.1081-24C>G"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: "100287102"
      feature_type: Transcript
      feature: NR_046018.2
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1562"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: "102466751"
      feature_type: Transcript
      feature: NR_106918.1
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1398"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: regulatory_region_variant
      impact: MODIFIER
      symbol: ""
      gene: ""
      feature_type: RegulatoryFeature
      feature: ENSR00000344266
      feature_biotype: CTCF_binding_site
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: ~
      variant_class: SNV
      minimised: ~
      symbol_source: ~
      hgnc_id: ~
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
  allele_counts:
    - cohort: ~
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 37056
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19882
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17174
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 624
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 9554
              nhomalt: 0
              af: 0.000104668
            xx:
              ac: 0
              an: 4306
              nhomalt: 0
              af: 0
            xy:
              ac: 1
              an: 5248
              nhomalt: 0
              af: 0.000190549
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2268
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1238
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1030
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4626
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2054
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2572
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5348
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1470
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3878
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 238
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 104
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 45876
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26958
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18918
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1392
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 706
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 686
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3074
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 760
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2314
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 1
          an: 110056
          nhomalt: 0
          af: 0.00000908628
        xx:
          ac: 0
          an: 57820
          nhomalt: 0
          af: 0
        xy:
          ac: 1
          an: 52236
          nhomalt: 0
          af: 0.0000191439
      raw:
        ac: 1
        an: 134496
        nhomalt: 0
        af: 0.00000743517
      popmax: amr
      af_popmax: 0.000104668
      ac_popmax: 1
      an_popmax: 9554
      nhomalt_popmax: 0
    - cohort: controls_and_biobanks
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 8100
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4202
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3898
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 12
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 3254
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1720
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1534
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 84
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 54
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2224
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 946
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1278
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 2642
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 324
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2318
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 188
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 108
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 80
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 4658
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2270
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2388
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 548
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 284
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 264
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2124
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 602
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1522
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 23852
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 10522
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 13330
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 28694
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_cancer
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 36760
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19740
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17020
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 624
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 9438
              nhomalt: 0
              af: 0.000105955
            xx:
              ac: 0
              an: 4276
              nhomalt: 0
              af: 0
            xy:
              ac: 1
              an: 5162
              nhomalt: 0
              af: 0.000193723
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2158
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1154
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1004
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4416
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1964
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2452
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5348
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1470
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3878
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 228
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 130
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43706
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26112
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17594
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1344
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 686
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 658
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3046
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 744
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2302
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 1
          an: 107068
          nhomalt: 0
          af: 0.00000933986
        xx:
          ac: 0
          an: 56588
          nhomalt: 0
          af: 0
        xy:
          ac: 1
          an: 50480
          nhomalt: 0
          af: 0.0000198098
      raw:
        ac: 1
        an: 130996
        nhomalt: 0
        af: 0.00000763382
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_neuro
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 29184
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 16880
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 12304
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 594
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 286
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 308
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 9312
              nhomalt: 0
              af: 0.000107388
            xx:
              ac: 0
              an: 4208
              nhomalt: 0
              af: 0
            xy:
              ac: 1
              an: 5104
              nhomalt: 0
              af: 0.000195925
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2220
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1218
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1002
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4626
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2054
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2572
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3366
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 416
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2950
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 236
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 102
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43372
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 25940
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17432
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1328
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 678
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 650
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3074
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 760
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2314
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 1
          an: 97312
          nhomalt: 0
          af: 0.0000102762
        xx:
          ac: 0
          an: 52574
          nhomalt: 0
          af: 0
        xy:
          ac: 1
          an: 44738
          nhomalt: 0
          af: 0.0000223524
      raw:
        ac: 1
        an: 118850
        nhomalt: 0
        af: 0.00000841397
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_topmed
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 21914
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 10532
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11382
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 60
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 38
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 22
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8056
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3394
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4662
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 650
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 176
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 474
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 3298
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1252
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2046
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5278
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1426
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3852
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 206
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 116
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 90
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 13400
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 5830
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 7570
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 978
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 460
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 518
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3060
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 758
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2302
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 56900
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 23982
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 32918
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 70334
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_v2
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 25570
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 14150
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11420
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 624
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 8568
              nhomalt: 0
              af: 0.000116713
            xx:
              ac: 0
              an: 3810
              nhomalt: 0
              af: 0
            xy:
              ac: 1
              an: 4758
              nhomalt: 0
              af: 0.000210172
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2028
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1130
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 898
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2500
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1186
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1314
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3404
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 606
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2798
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 230
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 35656
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 22250
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 13406
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1248
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 640
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 608
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2348
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1882
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 1
          an: 82176
          nhomalt: 0
          af: 0.000012169
        xx:
          ac: 0
          an: 44682
          nhomalt: 0
          af: 0
        xy:
          ac: 1
          an: 37494
          nhomalt: 0
          af: 0.0000266709
      raw:
        ac: 1
        an: 100494
        nhomalt: 0
        af: 0.00000995084
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
  nonpar: false
  effect_info:
    primate_ai_score: ~
    revel_score: ~
    splice_ai_max_ds: ~
    splice_ai_consequence: ~
    cadd_raw: ~
    cadd_phred: 5.837
  variant_info:
    variant_type: multi-snv
    allele_type: snv
    n_alt_alleles: 2
    was_mixed: false
    monoallelic: false
    var_dp: 2
  quality_info:
    as_fs: 18.3769
    inbreeding_coeff: -0.00000751019
    as_mq: 45.4443
    mq_rank_sum: 2.079
    as_mq_rank_sum: 2.079
    as_qd: 8.72
    read_pos_rank_sum: 0.124
    as_read_pos_rank_sum: 0.124
    as_sor: 0.160635
    positive_train_site: false
    negative_train_site: true
    as_vqslod: -3.027
    as_culprit: AS_FS
    segdup: false
    lcr: false
    transmitted_singleton: false
    as_pab_max: 0.647606
    as_qual_approx: 1308
    as_sb_table: "76"
  age_info:
    age_hist_hom_bin_freq: []
    age_hist_hom_n_smaller: 0
    age_hist_hom_n_larger: 0
    age_hist_het_bin_freq: []
    age_hist_het_n_smaller: 0
    age_hist_het_n_larger: 0
  depth_info:
    dp_hist_all_n_larger: 559
    dp_hist_alt_n_larger: 0
    dp_hist_all_bin_freq: []
    dp_hist_alt_bin_freq: []
- chrom: chr1
  pos: 15973
  ref_allele: G
  alt_allele: A
  filters: []
  vep:
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000450305
      feature_biotype: transcribed_unprocessed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "2303"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000456328
      feature_biotype: processed_transcript
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1564"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: 1
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: ENSG00000227232
      feature_type: Transcript
      feature: ENST00000488147
      feature_biotype: unprocessed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "ENST00000488147.1:n.1068-26C>T"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: ENSG00000278267
      feature_type: Transcript
      feature: ENST00000619216
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1396"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: "653635"
      feature_type: Transcript
      feature: NR_024540.1
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "NR_024540.1:n.1081-26C>T"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: "100287102"
      feature_type: Transcript
      feature: NR_046018.2
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1564"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: "102466751"
      feature_type: Transcript
      feature: NR_106918.1
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1396"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: regulatory_region_variant
      impact: MODIFIER
      symbol: ""
      gene: ""
      feature_type: RegulatoryFeature
      feature: ENSR00000344266
      feature_biotype: CTCF_binding_site
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: ~
      variant_class: SNV
      minimised: ~
      symbol_source: ~
      hgnc_id: ~
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
  allele_counts:
    - cohort: ~
      by_population:
        - population: afr
          counts:
            overall:
              ac: 2
              an: 37068
              nhomalt: 0
              af: 0.0000539549
            xx:
              ac: 2
              an: 19888
              nhomalt: 0
              af: 0.000100563
            xy:
              ac: 0
              an: 17180
              nhomalt: 0
              af: 0
          faf95: 0.00000894
          faf99: 0.00000334
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9626
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4332
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5294
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2276
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1242
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1034
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4652
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2060
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2592
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5366
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3900
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 240
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 136
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 104
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 46074
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 27052
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 19022
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1390
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 706
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 684
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3084
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 754
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2330
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 110404
          nhomalt: 0
          af: 0.0000181153
        xx:
          ac: 2
          an: 57950
          nhomalt: 0
          af: 0.0000345125
        xy:
          ac: 0
          an: 52454
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 134654
        nhomalt: 0
        af: 0.0000297058
      popmax: afr
      af_popmax: 0.0000539549
      ac_popmax: 2
      an_popmax: 37068
      nhomalt_popmax: 0
    - cohort: controls_and_biobanks
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 8100
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4200
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3900
              nhomalt: 0
              af: 0
          faf95: 0.00000894
          faf99: 0.00000334
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 12
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 3266
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1728
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1538
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 84
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 54
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2234
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 950
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1284
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 2656
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 326
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2330
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 190
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 110
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 80
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 4692
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2280
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2412
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 546
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 282
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 264
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2134
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 604
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1530
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 23932
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 10546
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 13386
          nhomalt: 0
          af: 0
      raw:
        ac: 1
        an: 28778
        nhomalt: 0
        af: 0.0000347488
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_cancer
      by_population:
        - population: afr
          counts:
            overall:
              ac: 2
              an: 36772
              nhomalt: 0
              af: 0.0000543892
            xx:
              ac: 2
              an: 19746
              nhomalt: 0
              af: 0.000101286
            xy:
              ac: 0
              an: 17026
              nhomalt: 0
              af: 0
          faf95: 0.00000894
          faf99: 0.00000334
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9504
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4300
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5204
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2166
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1158
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1008
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4438
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1970
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2468
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5366
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3900
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 230
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43888
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26206
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17682
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1342
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 686
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 656
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3056
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 738
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2318
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 107390
          nhomalt: 0
          af: 0.0000186237
        xx:
          ac: 2
          an: 56716
          nhomalt: 0
          af: 0.0000352634
        xy:
          ac: 0
          an: 50674
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 131136
        nhomalt: 0
        af: 0.0000305027
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_neuro
      by_population:
        - population: afr
          counts:
            overall:
              ac: 2
              an: 29190
              nhomalt: 0
              af: 0.0000685166
            xx:
              ac: 2
              an: 16886
              nhomalt: 0
              af: 0.000118441
            xy:
              ac: 0
              an: 12304
              nhomalt: 0
              af: 0
          faf95: 0.00000894
          faf99: 0.00000334
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 598
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 288
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 310
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9378
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4230
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5148
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2226
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1220
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1006
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4652
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2060
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2592
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3388
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 420
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2968
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 238
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 136
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 102
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43560
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26032
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17528
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1324
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 676
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 648
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3084
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 754
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2330
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 97638
          nhomalt: 0
          af: 0.0000204838
        xx:
          ac: 2
          an: 52702
          nhomalt: 0
          af: 0.0000379492
        xy:
          ac: 0
          an: 44936
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 118984
        nhomalt: 0
        af: 0.000033618
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_topmed
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 21934
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 10540
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11394
              nhomalt: 0
              af: 0
          faf95: 0.00000894
          faf99: 0.00000334
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 60
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 38
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 22
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8120
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3416
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4704
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 654
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 178
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 476
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 3318
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1254
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2064
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5296
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1422
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3874
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 208
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 118
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 90
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 13464
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 5850
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 7614
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 980
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 464
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 516
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3070
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 752
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2318
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 57104
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 24032
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 33072
          nhomalt: 0
          af: 0
      raw:
        ac: 1
        an: 70476
        nhomalt: 0
        af: 0.0000141892
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_v2
      by_population:
        - population: afr
          counts:
            overall:
              ac: 1
              an: 25588
              nhomalt: 0
              af: 0.0000390808
            xx:
              ac: 1
              an: 14164
              nhomalt: 0
              af: 0.0000706015
            xy:
              ac: 0
              an: 11424
              nhomalt: 0
              af: 0
          faf95: 0.00000894
          faf99: 0.00000334
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8634
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3834
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4800
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2034
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 900
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2520
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1188
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1332
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3426
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 604
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2822
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 232
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 35796
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 22314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 13482
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1244
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 638
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 606
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2356
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 460
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1896
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 1
          an: 82458
          nhomalt: 0
          af: 0.0000121274
        xx:
          ac: 1
          an: 44784
          nhomalt: 0
          af: 0.0000223294
        xy:
          ac: 0
          an: 37674
          nhomalt: 0
          af: 0
      raw:
        ac: 2
        an: 100600
        nhomalt: 0
        af: 0.0000198807
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
  nonpar: false
  effect_info:
    primate_ai_score: ~
    revel_score: ~
    splice_ai_max_ds: ~
    splice_ai_consequence: ~
    cadd_raw: ~
    cadd_phred: 5.483
  variant_info:
    variant_type: multi-snv
    allele_type: snv
    n_alt_alleles: 3
    was_mixed: false
    monoallelic: false
    var_dp: 3
  quality_info:
    as_fs: 5.44066
    inbreeding_coeff: -0.0000296831
    as_mq: 45.042
    mq_rank_sum: -0.355
    as_mq_rank_sum: -0.717
    as_qd: 4.3829
    read_pos_rank_sum: -0.536
    as_read_pos_rank_sum: -0.536
    as_sor: 1.10954
    positive_train_site: false
    negative_train_site: true
    as_vqslod: -2.257
    as_culprit: AS_QD
    segdup: false
    lcr: false
    transmitted_singleton: false
    as_pab_max: 1
    as_qual_approx: 1179
    as_sb_table: "158"
  age_info:
    age_hist_hom_bin_freq: []
    age_hist_hom_n_smaller: 0
    age_hist_hom_n_larger: 0
    age_hist_het_bin_freq: []
    age_hist_het_n_smaller: 0
    age_hist_het_n_larger: 0
  depth_info:
    dp_hist_all_n_larger: 559
    dp_hist_alt_n_larger: 0
    dp_hist_all_bin_freq: []
    dp_hist_alt_bin_freq: []
- chrom: chr1
  pos: 15973
  ref_allele: G
  alt_allele: C
  filters: []
  vep:
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000450305
      feature_biotype: transcribed_unprocessed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "2303"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000456328
      feature_biotype: processed_transcript
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1564"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: 1
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: ENSG00000227232
      feature_type: Transcript
      feature: ENST00000488147
      feature_biotype: unprocessed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "ENST00000488147.1:n.1068-26C>G"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: ENSG00000278267
      feature_type: Transcript
      feature: ENST00000619216
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1396"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: "653635"
      feature_type: Transcript
      feature: NR_024540.1
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "NR_024540.1:n.1081-26C>G"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: "100287102"
      feature_type: Transcript
      feature: NR_046018.2
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1564"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: "102466751"
      feature_type: Transcript
      feature: NR_106918.1
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1396"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: C
      consequence: regulatory_region_variant
      impact: MODIFIER
      symbol: ""
      gene: ""
      feature_type: RegulatoryFeature
      feature: ENSR00000344266
      feature_biotype: CTCF_binding_site
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: ~
      variant_class: SNV
      minimised: ~
      symbol_source: ~
      hgnc_id: ~
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
  allele_counts:
    - cohort: ~
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 37070
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19888
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17182
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 2
              an: 9626
              nhomalt: 0
              af: 0.000207771
            xx:
              ac: 0
              an: 4332
              nhomalt: 0
              af: 0
            xy:
              ac: 2
              an: 5294
              nhomalt: 0
              af: 0.000377786
          faf95: 0.00003622
          faf99: 0.00001477
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2276
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1242
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1034
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4652
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2060
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2592
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5366
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3900
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 240
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 136
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 104
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 46074
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 27052
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 19022
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1390
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 706
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 684
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3084
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 754
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2330
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 110406
          nhomalt: 0
          af: 0.000018115
        xx:
          ac: 0
          an: 57950
          nhomalt: 0
          af: 0
        xy:
          ac: 2
          an: 52456
          nhomalt: 0
          af: 0.0000381272
      raw:
        ac: 6
        an: 134654
        nhomalt: 1
        af: 0.0000445586
      popmax: amr
      af_popmax: 0.000207771
      ac_popmax: 2
      an_popmax: 9626
      nhomalt_popmax: 0
    - cohort: controls_and_biobanks
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 8100
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4200
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3900
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 12
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 3266
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1728
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1538
              nhomalt: 0
              af: 0
          faf95: 0.00003622
          faf99: 0.00001477
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 84
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 54
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2234
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 950
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1284
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 2656
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 326
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2330
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 190
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 110
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 80
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 4692
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2280
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2412
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 546
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 282
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 264
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2134
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 604
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1530
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 23932
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 10546
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 13386
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 28778
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_cancer
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 36774
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19746
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17028
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 2
              an: 9504
              nhomalt: 0
              af: 0.000210438
            xx:
              ac: 0
              an: 4300
              nhomalt: 0
              af: 0
            xy:
              ac: 2
              an: 5204
              nhomalt: 0
              af: 0.00038432
          faf95: 0.00003622
          faf99: 0.00001477
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2166
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1158
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1008
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4438
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1970
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2468
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5366
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3900
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 230
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43888
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26206
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17682
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1342
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 686
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 656
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3056
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 738
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2318
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 107392
          nhomalt: 0
          af: 0.0000186234
        xx:
          ac: 0
          an: 56716
          nhomalt: 0
          af: 0
        xy:
          ac: 2
          an: 50676
          nhomalt: 0
          af: 0.0000394664
      raw:
        ac: 6
        an: 131136
        nhomalt: 1
        af: 0.000045754
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_neuro
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 29192
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 16886
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 12306
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 598
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 288
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 310
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 2
              an: 9378
              nhomalt: 0
              af: 0.000213265
            xx:
              ac: 0
              an: 4230
              nhomalt: 0
              af: 0
            xy:
              ac: 2
              an: 5148
              nhomalt: 0
              af: 0.0003885
          faf95: 0.00003622
          faf99: 0.00001477
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2226
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1220
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1006
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4652
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2060
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2592
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3388
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 420
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2968
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 238
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 136
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 102
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43560
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26032
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17528
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1324
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 676
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 648
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3084
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 754
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2330
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 97640
          nhomalt: 0
          af: 0.0000204834
        xx:
          ac: 0
          an: 52702
          nhomalt: 0
          af: 0
        xy:
          ac: 2
          an: 44938
          nhomalt: 0
          af: 0.0000445058
      raw:
        ac: 6
        an: 118984
        nhomalt: 1
        af: 0.0000504269
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_topmed
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 21934
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 10540
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11394
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 60
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 38
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 22
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 2
              an: 8120
              nhomalt: 0
              af: 0.000246305
            xx:
              ac: 0
              an: 3416
              nhomalt: 0
              af: 0
            xy:
              ac: 2
              an: 4704
              nhomalt: 0
              af: 0.00042517
          faf95: 0.00003622
          faf99: 0.00001477
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 654
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 178
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 476
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 3318
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1254
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2064
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5296
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1422
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3874
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 208
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 118
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 90
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 13464
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 5850
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 7614
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 980
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 464
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 516
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3070
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 752
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2318
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 57104
          nhomalt: 0
          af: 0.0000350238
        xx:
          ac: 0
          an: 24032
          nhomalt: 0
          af: 0
        xy:
          ac: 2
          an: 33072
          nhomalt: 0
          af: 0.0000604741
      raw:
        ac: 5
        an: 70476
        nhomalt: 1
        af: 0.0000709461
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_v2
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 25590
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 14164
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11426
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 2
              an: 8634
              nhomalt: 0
              af: 0.000231642
            xx:
              ac: 0
              an: 3834
              nhomalt: 0
              af: 0
            xy:
              ac: 2
              an: 4800
              nhomalt: 0
              af: 0.000416667
          faf95: 0.00003622
          faf99: 0.00001477
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2034
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 900
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2520
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1188
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1332
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3426
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 604
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2822
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 232
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 35796
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 22314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 13482
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1244
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 638
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 606
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2356
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 460
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1896
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 82460
          nhomalt: 0
          af: 0.0000242542
        xx:
          ac: 0
          an: 44784
          nhomalt: 0
          af: 0
        xy:
          ac: 2
          an: 37676
          nhomalt: 0
          af: 0.0000530842
      raw:
        ac: 4
        an: 100600
        nhomalt: 0
        af: 0.0000397614
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
  nonpar: false
  effect_info:
    primate_ai_score: ~
    revel_score: ~
    splice_ai_max_ds: ~
    splice_ai_consequence: ~
    cadd_raw: ~
    cadd_phred: 5.063
  variant_info:
    variant_type: multi-snv
    allele_type: snv
    n_alt_alleles: 3
    was_mixed: false
    monoallelic: false
    var_dp: 3
  quality_info:
    as_fs: 3.55669
    inbreeding_coeff: 0.333304
    as_mq: 37.123
    mq_rank_sum: -0.355
    as_mq_rank_sum: -0.151
    as_qd: 15.5085
    read_pos_rank_sum: -0.536
    as_read_pos_rank_sum: -0.259
    as_sor: 1.02889
    positive_train_site: false
    negative_train_site: true
    as_vqslod: -2.5191
    as_culprit: AS_MQ
    segdup: false
    lcr: false
    transmitted_singleton: false
    as_pab_max: 1
    as_qual_approx: 915
    as_sb_table: "158"
  age_info:
    age_hist_hom_bin_freq: []
    age_hist_hom_n_smaller: 0
    age_hist_hom_n_larger: 0
    age_hist_het_bin_freq: []
    age_hist_het_n_smaller: 0
    age_hist_het_n_larger: 0
  depth_info:
    dp_hist_all_n_larger: 559
    dp_hist_alt_n_larger: 0
    dp_hist_all_bin_freq: []
    dp_hist_alt_bin_freq: []
- chrom: chr1
  pos: 15974
  ref_allele: C
  alt_allele: G
  filters: []
  vep:
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000450305
      feature_biotype: transcribed_unprocessed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "2304"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000456328
      feature_biotype: processed_transcript
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1565"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: 1
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: ENSG00000227232
      feature_type: Transcript
      feature: ENST00000488147
      feature_biotype: unprocessed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "ENST00000488147.1:n.1068-27G>C"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: ENSG00000278267
      feature_type: Transcript
      feature: ENST00000619216
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1395"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: "653635"
      feature_type: Transcript
      feature: NR_024540.1
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "NR_024540.1:n.1081-27G>C"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: "100287102"
      feature_type: Transcript
      feature: NR_046018.2
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1565"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: "102466751"
      feature_type: Transcript
      feature: NR_106918.1
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1395"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: regulatory_region_variant
      impact: MODIFIER
      symbol: ""
      gene: ""
      feature_type: RegulatoryFeature
      feature: ENSR00000344266
      feature_biotype: CTCF_binding_site
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: ~
      variant_class: SNV
      minimised: ~
      symbol_source: ~
      hgnc_id: ~
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
  allele_counts:
    - cohort: ~
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 37020
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19854
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17166
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 9600
              nhomalt: 0
              af: 0.000104167
            xx:
              ac: 1
              an: 4304
              nhomalt: 0
              af: 0.000232342
            xy:
              ac: 0
              an: 5296
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2252
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1230
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1022
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4642
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2056
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2586
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5348
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1482
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3866
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 238
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 104
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 1
              an: 46052
              nhomalt: 0
              af: 0.0000217146
            xx:
              ac: 1
              an: 27020
              nhomalt: 0
              af: 0.0000370096
            xy:
              ac: 0
              an: 19032
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1394
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 710
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 684
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3074
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 762
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2312
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 110248
          nhomalt: 0
          af: 0.0000181409
        xx:
          ac: 2
          an: 57864
          nhomalt: 0
          af: 0.0000345638
        xy:
          ac: 0
          an: 52384
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 134398
        nhomalt: 1
        af: 0.0000297623
      popmax: amr
      af_popmax: 0.000104167
      ac_popmax: 1
      an_popmax: 9600
      nhomalt_popmax: 0
    - cohort: controls_and_biobanks
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 8096
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4198
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3898
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 12
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 3256
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1716
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1540
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 80
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 52
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 28
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2232
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 950
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1282
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 2622
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 328
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2294
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 188
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 108
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 80
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 4698
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2282
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2416
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 552
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 290
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 262
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2124
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 608
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1516
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 23878
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 10544
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 13334
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 28664
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_cancer
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 36724
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19712
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17012
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 9480
              nhomalt: 0
              af: 0.000105485
            xx:
              ac: 1
              an: 4274
              nhomalt: 0
              af: 0.000233973
            xy:
              ac: 0
              an: 5206
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2142
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1144
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 998
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4426
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1964
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2462
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5348
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1482
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3866
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 228
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 130
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 1
              an: 43856
              nhomalt: 0
              af: 0.0000228019
            xx:
              ac: 1
              an: 26168
              nhomalt: 0
              af: 0.0000382146
            xy:
              ac: 0
              an: 17688
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1346
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 690
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 656
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3046
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 746
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2300
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 107224
          nhomalt: 0
          af: 0.0000186525
        xx:
          ac: 2
          an: 56622
          nhomalt: 0
          af: 0.000035322
        xy:
          ac: 0
          an: 50602
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 130884
        nhomalt: 1
        af: 0.0000305614
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_neuro
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 29162
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 16860
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 12302
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 598
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 286
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 9352
              nhomalt: 0
              af: 0.000106929
            xx:
              ac: 1
              an: 4204
              nhomalt: 0
              af: 0.000237869
            xy:
              ac: 0
              an: 5148
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2206
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1210
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 996
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4642
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2056
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2586
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3356
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 424
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2932
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 236
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 102
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 1
              an: 43536
              nhomalt: 0
              af: 0.0000229695
            xx:
              ac: 1
              an: 26012
              nhomalt: 0
              af: 0.0000384438
            xy:
              ac: 0
              an: 17524
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1328
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 680
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 648
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3074
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 762
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2312
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 97490
          nhomalt: 0
          af: 0.0000205149
        xx:
          ac: 2
          an: 52628
          nhomalt: 0
          af: 0.0000380026
        xy:
          ac: 0
          an: 44862
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 118746
        nhomalt: 1
        af: 0.0000336853
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_topmed
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 21902
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 10526
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11376
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 60
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 38
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 22
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 8108
              nhomalt: 0
              af: 0.000123335
            xx:
              ac: 1
              an: 3396
              nhomalt: 0
              af: 0.000294464
            xy:
              ac: 0
              an: 4712
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 646
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 178
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 468
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 3312
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1252
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2060
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5278
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1438
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3840
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 206
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 116
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 90
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 13478
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 5842
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 7636
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 982
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 516
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3060
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 760
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2300
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 1
          an: 57032
          nhomalt: 0
          af: 0.000017534
        xx:
          ac: 1
          an: 24012
          nhomalt: 0
          af: 0.0000416458
        xy:
          ac: 0
          an: 33020
          nhomalt: 0
          af: 0
      raw:
        ac: 3
        an: 70272
        nhomalt: 1
        af: 0.0000426913
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_v2
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 25546
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 14138
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11408
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 1
              an: 8614
              nhomalt: 0
              af: 0.00011609
            xx:
              ac: 1
              an: 3816
              nhomalt: 0
              af: 0.000262055
            xy:
              ac: 0
              an: 4798
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2012
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1122
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 890
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2514
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1186
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1328
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3406
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 616
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2790
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 230
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 1
              an: 35780
              nhomalt: 0
              af: 0.0000279486
            xx:
              ac: 1
              an: 22286
              nhomalt: 0
              af: 0.0000448712
            xy:
              ac: 0
              an: 13494
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1248
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 640
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 608
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2348
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1882
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 2
          an: 82326
          nhomalt: 0
          af: 0.0000242937
        xx:
          ac: 2
          an: 44714
          nhomalt: 0
          af: 0.0000447287
        xy:
          ac: 0
          an: 37612
          nhomalt: 0
          af: 0
      raw:
        ac: 4
        an: 100384
        nhomalt: 1
        af: 0.000039847
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
  nonpar: false
  effect_info:
    primate_ai_score: ~
    revel_score: ~
    splice_ai_max_ds: ~
    splice_ai_consequence: ~
    cadd_raw: ~
    cadd_phred: 1.385
  variant_info:
    variant_type: multi-snv
    allele_type: snv
    n_alt_alleles: 2
    was_mixed: false
    monoallelic: false
    var_dp: 2
  quality_info:
    as_fs: 19.3275
    inbreeding_coeff: 0.499985
    as_mq: 47.4448
    mq_rank_sum: 2.55
    as_mq_rank_sum: 3.286
    as_qd: 13.0658
    read_pos_rank_sum: -0.645
    as_read_pos_rank_sum: -0.645
    as_sor: 0.238122
    positive_train_site: false
    negative_train_site: true
    as_vqslod: -3.7033
    as_culprit: AS_MQRankSum
    segdup: false
    lcr: false
    transmitted_singleton: false
    as_pab_max: 0.850554
    as_qual_approx: 1986
    as_sb_table: "66"
  age_info:
    age_hist_hom_bin_freq: []
    age_hist_hom_n_smaller: 0
    age_hist_hom_n_larger: 0
    age_hist_het_bin_freq: []
    age_hist_het_n_smaller: 0
    age_hist_het_n_larger: 0
  depth_info:
    dp_hist_all_n_larger: 561
    dp_hist_alt_n_larger: 0
    dp_hist_all_bin_freq: []
    dp_hist_alt_bin_freq: []
- chrom: chr1
  pos: 15975
  ref_allele: A
  alt_allele: G
  filters: []
  vep:
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000450305
      feature_biotype: transcribed_unprocessed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "2305"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000456328
      feature_biotype: processed_transcript
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1566"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: 1
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: ENSG00000227232
      feature_type: Transcript
      feature: ENST00000488147
      feature_biotype: unprocessed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "ENST00000488147.1:n.1068-28T>C"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: ENSG00000278267
      feature_type: Transcript
      feature: ENST00000619216
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1394"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: "653635"
      feature_type: Transcript
      feature: NR_024540.1
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "NR_024540.1:n.1081-28T>C"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: "100287102"
      feature_type: Transcript
      feature: NR_046018.2
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1566"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: "102466751"
      feature_type: Transcript
      feature: NR_106918.1
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1394"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: G
      consequence: regulatory_region_variant
      impact: MODIFIER
      symbol: ""
      gene: ""
      feature_type: RegulatoryFeature
      feature: ENSR00000344266
      feature_biotype: CTCF_binding_site
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: ~
      variant_class: SNV
      minimised: ~
      symbol_source: ~
      hgnc_id: ~
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
  allele_counts:
    - cohort: ~
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 37052
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19886
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17166
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 630
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4324
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5304
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2274
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1240
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1034
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4632
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2052
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2580
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5370
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1478
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3892
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 232
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 46096
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 27066
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 19030
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1398
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 708
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 690
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3106
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 766
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2340
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 110418
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 57968
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 52450
          nhomalt: 0
          af: 0
      raw:
        ac: 2
        an: 134428
        nhomalt: 0
        af: 0.0000148779
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: controls_and_biobanks
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 8082
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4190
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3892
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 12
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 3264
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1732
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1532
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 84
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 54
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2218
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 944
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1274
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 2652
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 332
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2320
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 186
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 108
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 78
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 4692
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2278
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2414
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 554
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 286
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 268
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2134
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 608
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1526
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 23896
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 10544
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 13352
          nhomalt: 0
          af: 0
      raw:
        ac: 1
        an: 28646
        nhomalt: 0
        af: 0.0000349089
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_cancer
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 36756
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19744
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17012
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 630
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9512
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4294
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5218
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2162
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1154
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1008
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4422
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1966
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2456
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5370
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1478
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3892
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 224
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 130
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 94
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43918
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26222
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17696
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1352
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 690
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 662
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3078
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 750
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2328
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 107424
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 56742
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 50682
          nhomalt: 0
          af: 0
      raw:
        ac: 2
        an: 130948
        nhomalt: 0
        af: 0.0000152732
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_neuro
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 29182
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 16882
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 12300
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 600
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 288
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 312
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9380
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4222
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5158
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2224
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1218
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1006
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4632
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2052
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2580
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3388
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 426
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2962
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 230
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 96
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 43582
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26048
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17534
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1332
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 678
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 654
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3106
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 766
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2340
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 97656
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 52714
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 44942
          nhomalt: 0
          af: 0
      raw:
        ac: 2
        an: 118802
        nhomalt: 0
        af: 0.0000168347
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_topmed
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 21918
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 10540
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11378
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 60
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 38
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 22
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8132
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3412
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4720
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 652
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 178
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 474
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 3298
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1244
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2054
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5302
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1436
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3866
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 202
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 116
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 86
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 13458
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 5846
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 7612
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 984
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 462
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 522
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3092
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 764
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2328
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 57098
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 24036
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 33062
          nhomalt: 0
          af: 0
      raw:
        ac: 2
        an: 70230
        nhomalt: 0
        af: 0.0000284779
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_v2
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 25586
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 14168
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11418
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 630
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8634
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3822
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4812
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2036
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 904
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2518
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1188
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1330
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3416
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 606
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2810
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 224
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 92
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 35826
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 22326
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 13500
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1252
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 640
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 612
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2380
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 470
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1910
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 82502
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 44798
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 37704
          nhomalt: 0
          af: 0
      raw:
        ac: 2
        an: 100460
        nhomalt: 0
        af: 0.0000199084
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
  nonpar: false
  effect_info:
    primate_ai_score: ~
    revel_score: ~
    splice_ai_max_ds: ~
    splice_ai_consequence: ~
    cadd_raw: ~
    cadd_phred: 8.532
  variant_info:
    variant_type: snv
    allele_type: snv
    n_alt_alleles: 1
    was_mixed: false
    monoallelic: false
    var_dp: 1
  quality_info:
    as_fs: 1.29277
    inbreeding_coeff: -0.0000149012
    as_mq: 44.7114
    mq_rank_sum: 1.611
    as_mq_rank_sum: 1.611
    as_qd: 5.3617
    read_pos_rank_sum: -1.396
    as_read_pos_rank_sum: -1.396
    as_sor: 0.963111
    positive_train_site: false
    negative_train_site: true
    as_vqslod: -2.989
    as_culprit: AS_QD
    segdup: false
    lcr: false
    transmitted_singleton: false
    as_pab_max: 0.404873
    as_qual_approx: 252
    as_sb_table: "21"
  age_info:
    age_hist_hom_bin_freq: []
    age_hist_hom_n_smaller: 0
    age_hist_hom_n_larger: 0
    age_hist_het_bin_freq: []
    age_hist_het_n_smaller: 0
    age_hist_het_n_larger: 0
  depth_info:
    dp_hist_all_n_larger: 561
    dp_hist_alt_n_larger: 0
    dp_hist_all_bin_freq: []
    dp_hist_alt_bin_freq: []
- chrom: chr1
  pos: 15977
  ref_allele: G
  alt_allele: A
  filters: []
  vep:
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000450305
      feature_biotype: transcribed_unprocessed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "2307"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: ENSG00000223972
      feature_type: Transcript
      feature: ENST00000456328
      feature_biotype: processed_transcript
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1568"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: 1
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: ENSG00000227232
      feature_type: Transcript
      feature: ENST00000488147
      feature_biotype: unprocessed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "ENST00000488147.1:n.1068-30C>T"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: ENSG00000278267
      feature_type: Transcript
      feature: ENST00000619216
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1392"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: HGNC
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: intron_variant&non_coding_transcript_variant
      impact: MODIFIER
      symbol: WASH7P
      gene: "653635"
      feature_type: Transcript
      feature: NR_024540.1
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: 8/10
      hgvsc: "NR_024540.1:n.1081-30C>T"
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:38034"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: DDX11L1
      gene: "100287102"
      feature_type: Transcript
      feature: NR_046018.2
      feature_biotype: transcribed_pseudogene
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1568"
      strand: "1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:37102"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: downstream_gene_variant
      impact: MODIFIER
      symbol: MIR6859-1
      gene: "102466751"
      feature_type: Transcript
      feature: NR_106918.1
      feature_biotype: miRNA
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: "1392"
      strand: "-1"
      variant_class: SNV
      minimised: ~
      symbol_source: EntrezGene
      hgnc_id: "HGNC:50039"
      canonical: true
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
    - allele: A
      consequence: regulatory_region_variant
      impact: MODIFIER
      symbol: ""
      gene: ""
      feature_type: RegulatoryFeature
      feature: ENSR00000344266
      feature_biotype: CTCF_binding_site
      exon: ~
      intron: ~
      hgvsc: ~
      hgvsp: ~
      cdna_position: ~
      cds_position: ~
      protein_position: ~
      amino_acids: ~
      codons: ~
      dbsnp_id: "1"
      distance: ~
      strand: ~
      variant_class: SNV
      minimised: ~
      symbol_source: ~
      hgnc_id: ~
      canonical: ~
      tsl: ~
      appris: ~
      ccds: ~
      ensp: ~
      swissprot: ~
      trembl: ~
      uniparc: ~
      gene_pheno: ~
      sift: ~
      polyphen: ~
      domains: []
      hgvs_offset: ~
      motif_name: ~
      motif_pos: ~
      high_inf_pos: ~
      motif_score_change: ~
      lof: ~
      lof_filter: ~
      lof_flags: ~
      lof_info: ~
  allele_counts:
    - cohort: ~
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 37134
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19924
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17210
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 634
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 318
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9746
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4366
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5380
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2302
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1258
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1044
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4670
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2072
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2598
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5472
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1494
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3978
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 240
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 136
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 104
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 46698
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 27388
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 19310
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1404
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 710
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 694
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3138
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 766
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2372
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 111438
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 58430
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 53008
          nhomalt: 0
          af: 0
      raw:
        ac: 1
        an: 134888
        nhomalt: 0
        af: 0.00000741356
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: controls_and_biobanks
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 8112
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4210
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3902
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 30
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 12
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 18
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 3296
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1750
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1546
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 88
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 56
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 32
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2238
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 954
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1284
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 2706
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 326
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2380
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 190
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 110
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 80
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 4744
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2312
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2432
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 558
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 288
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 270
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2158
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 610
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1548
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 24120
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 10628
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 13492
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 28832
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_cancer
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 36838
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 19782
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17056
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 634
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 318
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9628
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4336
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5292
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2188
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1170
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1018
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4456
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1982
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2474
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5472
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1494
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3978
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 230
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 132
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 44500
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26552
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17948
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1356
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 692
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 664
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3110
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 750
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2360
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 108412
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 57206
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 51206
          nhomalt: 0
          af: 0
      raw:
        ac: 1
        an: 131384
        nhomalt: 0
        af: 0.00000761128
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_neuro
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 29240
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 16914
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 12326
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 604
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 290
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 314
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 9492
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 4262
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 5230
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2252
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1236
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1016
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 4670
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 2072
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2598
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3450
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 420
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3030
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 238
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 136
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 102
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 44134
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 26354
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 17780
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1340
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 682
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 658
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3138
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 766
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2372
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 98558
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 53132
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 45426
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 119214
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_topmed
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 21974
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 10564
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11410
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 60
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 38
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 22
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8228
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3444
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4784
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 658
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 184
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 474
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 3330
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1258
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2072
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 5402
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1450
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 3952
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 208
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 118
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 90
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 13668
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 5924
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 7744
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 992
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 466
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 526
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 3124
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 764
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2360
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 57644
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 24210
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 33434
          nhomalt: 0
          af: 0
      raw:
        ac: 1
        an: 70540
        nhomalt: 0
        af: 0.0000141764
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
    - cohort: non_v2
      by_population:
        - population: afr
          counts:
            overall:
              ac: 0
              an: 25636
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 14188
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 11448
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: ami
          counts:
            overall:
              ac: 0
              an: 634
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 316
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 318
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: amr
          counts:
            overall:
              ac: 0
              an: 8738
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 3858
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 4880
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: asj
          counts:
            overall:
              ac: 0
              an: 2056
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1146
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 910
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: eas
          counts:
            overall:
              ac: 0
              an: 2532
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 1198
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1334
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: fin
          counts:
            overall:
              ac: 0
              an: 3498
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 616
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 2882
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: mid
          counts:
            overall:
              ac: 0
              an: 232
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 134
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 98
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: nfe
          counts:
            overall:
              ac: 0
              an: 36264
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 22592
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 13672
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: oth
          counts:
            overall:
              ac: 0
              an: 1256
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 640
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 616
              nhomalt: 0
              af: 0
          faf95: ~
          faf99: ~
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
        - population: sas
          counts:
            overall:
              ac: 0
              an: 2404
              nhomalt: 0
              af: 0
            xx:
              ac: 0
              an: 468
              nhomalt: 0
              af: 0
            xy:
              ac: 0
              an: 1936
              nhomalt: 0
              af: 0
          faf95: 0
          faf99: 0
          faf95_xx: ~
          faf99_xx: ~
          faf95_xy: ~
          faf99_xy: ~
      by_sex:
        overall:
          ac: 0
          an: 83250
          nhomalt: 0
          af: 0
        xx:
          ac: 0
          an: 45156
          nhomalt: 0
          af: 0
        xy:
          ac: 0
          an: 38094
          nhomalt: 0
          af: 0
      raw:
        ac: 0
        an: 100826
        nhomalt: 0
        af: 0
      popmax: ~
      af_popmax: ~
      ac_popmax: ~
      an_popmax: ~
      nhomalt_popmax: ~
  nonpar: false
  effect_info:
    primate_ai_score: ~
    revel_score: ~
    splice_ai_max_ds: ~
    splice_ai_consequence: ~
    cadd_raw: ~
    cadd_phred: 4.644
  variant_info:
    variant_type: multi-snv
    allele_type: snv
    n_alt_alleles: 2
    was_mixed: false
    monoallelic: false
    var_dp: 2
  quality_info:
    as_fs: 1.34551
    inbreeding_coeff: -0.00000739098
    as_mq: 46.237
    mq_rank_sum: -0.067
    as_mq_rank_sum: 3.027
    as_qd: 3.17544
    read_pos_rank_sum: -1.001
    as_read_pos_rank_sum: -1.001
    as_sor: 0.367725
    positive_train_site: false
    negative_train_site: true
    as_vqslod: -2.5822
    as_culprit: AS_QD
    segdup: false
    lcr: false
    transmitted_singleton: false
    as_pab_max: 0.6875
    as_qual_approx: 181
    as_sb_table: "34"
  age_info:
    age_hist_hom_bin_freq: []
    age_hist_hom_n_smaller: 0
    age_hist_hom_n_larger: 0
    age_hist_het_bin_freq: []
    age_hist_het_n_smaller: 0
    age_hist_het_n_larger: 0
  depth_info:
    dp_hist_all_n_larger: 561
    dp_hist_alt_n_larger: 0
    dp_hist_all_bin_freq: []
    dp_hist_alt_bin_freq: []

