pub(crate) mod bam;
pub(crate) mod base;
pub(crate) mod bed;
pub(crate) mod blacklist;
pub(crate) mod cli_output;
pub(crate) mod clip_mode;
pub(crate) mod constants;
pub(crate) mod coverage;
pub(crate) mod formatters;
pub(crate) mod fragment;
pub(crate) mod fragment_iterators;
pub(crate) mod gc_tag;
pub(crate) mod indel_mode;
pub(crate) mod interval;
pub(crate) mod io;
pub(crate) mod iterator_counter;
pub(crate) mod kmers;
pub(crate) mod length_axis;
pub(crate) mod logging;
pub(crate) mod midpoint;
pub(crate) mod overlaps;
pub(crate) mod positioning;
pub(crate) mod progress;
pub(crate) mod read;
pub(crate) mod reference;
pub(crate) mod sampling;
pub(crate) mod scale_genome;
pub(crate) mod temp_chrom_names;
pub(crate) mod thread_pool;
pub(crate) mod tiled_run;
#[cfg(feature = "cmd_fragment_kmers")]
pub(crate) mod visualization;
pub(crate) mod window_fetch;
pub(crate) mod windowing;
pub(crate) mod writers;
pub(crate) mod zarr;
// Plotting helpers gated behind the plotters feature
#[cfg(feature = "plotters")]
pub(crate) mod plotters;
