# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "mafft-core"
version = "0.1.2"
authors = ["Lucas Goiriz <lucas.goiriz@csic.es>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Core MAFFT alignment engine: progressive alignment and iterative refinement"
homepage = "https://github.com/luksgrin/rust-MAFFT"
readme = "README.md"
keywords = [
    "bioinformatics",
    "alignment",
    "msa",
    "fasta",
    "mafft",
]
categories = [
    "science",
    "command-line-utilities",
]
license = "MIT AND BSD-3-Clause"
repository = "https://github.com/luksgrin/rust-MAFFT"
resolver = "2"

[lib]
name = "mafft_core"
path = "src/lib.rs"

[[test]]
name = "cross_validate_bb20027_dp"
path = "tests/cross_validate_bb20027_dp.rs"

[[test]]
name = "cross_validate_bl50_fft"
path = "tests/cross_validate_bl50_fft.rs"

[[test]]
name = "cross_validate_constrained_align"
path = "tests/cross_validate_constrained_align.rs"

[[test]]
name = "cross_validate_counteff"
path = "tests/cross_validate_counteff.rs"

[[test]]
name = "cross_validate_cpmx"
path = "tests/cross_validate_cpmx.rs"

[[test]]
name = "cross_validate_fft"
path = "tests/cross_validate_fft.rs"

[[test]]
name = "cross_validate_insertnewgaps"
path = "tests/cross_validate_insertnewgaps.rs"

[[test]]
name = "cross_validate_msalign"
path = "tests/cross_validate_msalign.rs"

[[test]]
name = "cross_validate_profile"
path = "tests/cross_validate_profile.rs"

[[test]]
name = "cross_validate_profile_align"
path = "tests/cross_validate_profile_align.rs"

[[test]]
name = "end_to_end"
path = "tests/end_to_end.rs"

[[test]]
name = "exp_residual_dump_compare"
path = "tests/exp_residual_dump_compare.rs"

[[test]]
name = "exp_residual_step10"
path = "tests/exp_residual_step10.rs"

[[test]]
name = "trace_refinement"
path = "tests/trace_refinement.rs"

[dependencies.mafft-align]
version = "0.1.0"

[dependencies.mafft-fft]
version = "0.1.0"

[dependencies.mafft-io]
version = "0.1.0"

[dependencies.mafft-scoring]
version = "0.1.0"

[dependencies.mafft-tree]
version = "0.1.0"

[dependencies.mafft-types]
version = "0.1.0"

[dependencies.rayon]
version = "1"

[dev-dependencies.libc]
version = "0.2"

[dev-dependencies.num-complex]
version = "0.4"
