>     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
-----MNGTE--------------GDNFYVPF----SNKTG-------------------
-LARSPYEYPQY------------------------YLAEPWK-----------------
--YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTV
TMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFG
NTHAIMGVAFTWIMALAC-AAPPLVG-WSRYIPEGMQCSCGPDYYTLNPNFNNESYVVYM
FVVHFLVPFVIIFFCYGRLLCTV----KEAAAAQQ-------------------------
--------------ESASTQKAEKEVTRMVVLMVIGFLVCWVPYASVAFYIFTHQGSDFG
ATFMTLPAFFAK-------SSALYNPVIYILMNKQFRNCMITTLCC----------GKNP
LGDDE--SGASTSKTEVSSVS-TSPVSPA-------------------------------
----------------------------------------------------------
>     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
-----MNGTE--------------GPNFYVPF----SNITG-------------------
-VVRSPFEQPQY------------------------YLAEPWQ-----------------
--FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTT
TLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFG
ENHAIMGVAFTWVMALAC-AAPPLVG-WSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYM
FVVHFTIPMIVIFFCYGQLVFTV----KEAAAQQQ-------------------------
--------------ESATTQKAEKEVTRMVIIMVIFFLICWLPYASVAMYIFTHQGSNFG
PIFMTLPAFFAK-------TASIYNPIIYIMMNKQFRNCMLTSLCC----------GKNP
LGDDE--ASATASKTE------TSQVAPA-------------------------------
----------------------------------------------------------
>     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
-----MNGTE--------------GINFYVPM----SNKTG-------------------
-VVRSPFEYPQY------------------------YLAEPWK-----------------
--YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTV
TFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFS
ATHAMMGIAFTWVMAFSC-AAPPLFG-WSRYMPEGMQCSCGPDYYTHNPDYHNESYVLYM
FVIHFIIPVVVIFFSYGRLICKV----REAAAQQQ-------------------------
--------------ESATTQKAEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTNKGADFT
ATLMAVPAFFSK-------SSSLYNPIIYVLMNKQFRNCMITTICC----------GKNP
FGDEDVSSTVSQSKTEVSSVS-SSQVSPA-------------------------------
----------------------------------------------------------
>     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
-----MNGTE--------------GKNFYVPM----SNRTG-------------------
-LVRSPFEYPQY------------------------YLAEPWQ-----------------
--FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTV
TFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFS
SSHAFAGIAFTWVMALAC-AAPPLFG-WSRYIPEGMQCSCGPDYYTLNPDYNNESYVIYM
FVCHFILPVAVIFFTYGRLVCTV----KAAAAQQQ-------------------------
--------------DSASTQKAEREVTKMVILMVFGFLIAWTPYATVAAWIFFNKGADFS
AKFMAIPAFFSK-------SSALYNPVIYVLLNKQFRNCMLTTIFC----------GKNP
LGDDE-SSTVSTSKTEVSS------VSPA-------------------------------
----------------------------------------------------------
>     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
-----MNGTE--------------GNNFYVPL----SNRTG-------------------
-LVRSPFEYPQY------------------------YLAEPWQ-----------------
--FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTV
TFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFS
STHASAGIAFTWVMAMAC-AAPPLVG-WSRYIPEGIQCSCGPDYYTLNPEYNNESYVLYM
FICHFILPVTIIFFTYGRLVCTV----KAAAAQQQ-------------------------
--------------DSASTQKAEREVTKMVILMVLGFLVAWTPYATVAAWIFFNKGAAFS
AQFMAIPAFFSK-------TSALYNPVIYVLLNKQFRSCMLTTLFC----------GKNP
LGDEE-SSTVSTSKTEVSS------VSPA-------------------------------
----------------------------------------------------------
>     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
-----MKQVPEF------------HEDFYIPIPLDINNLS--------------------
--AYSPFLVPQD------------------------HLGNQGI-----------------
--FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPL
SFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFK
TPHAIAGCILPWISALAA-SLPPLFG-WSRYIPEGLQCSCGPDWYTTNNKYNNESYVMFL
FCFCFAVPFGTIVFCYGQLLITL----KLAAKAQA-------------------------
--------------DSASTQKAEREVTKMVVVMVLGFLVCWAPYASFSLWIVSHRGEEFD
LRMATIPSCLSK-------ASTVYNPVIYVLMNKQFRSCMM-KMVC----------GKN-
IEEDE--ASTSSQVTQVSS------VAPEK------------------------------
----------------------------------------------------------
>     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
-----MRKMS--------------EEEFYL-----FKNIS--------------------
--SVGPWDGPQY------------------------HIAPVWA-----------------
--FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFP
VFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFS
SKHALTVVLATWTIGIGV-SIPPFFG-WSRFIPEGLQCSCGPDWYTVGTKYRSESYTWFL
FIFCFIVPLSLICFSYTQLLRAL----KAVAAQQQ-------------------------
--------------ESATTQKAEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLD
LRLVTIPSFFSK-------SACIYNPIIYCFMNKQFQACIM-KMVC----------GKA-
MTDES--DTCSSQKTEVSTVS-STQVGPN-------------------------------
----------------------------------------------------------
>     8=opsin, greensensitive  human (fragment) S07060
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------DLAETVIA-STI
SIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFD
AKLAIVGIAFSWIWAAVW-TAPPIFG-WSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVL
MVTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------
--------------ESESTQKAEKEVTRMVVVMVLAFC----------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------
>     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
-----MAQQWSLQRLAGRHPQDSYEDSTQSSI-FTYTNSNS-------------------
--TRGPFEGPNY------------------------HIAPRWV-----------------
--YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STI
SVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFD
AKLAIVGIAFSWIWAAVW-TAPPIFG-WSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVL
MVTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------
--------------ESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFH
PLMAALPAFFAK-------SATIYNPVIYVFMNRQFRNCIL-QLF-----------GKK-
VDDGS--ELSSASKTEVSSV---SSVSPA-------------------------------
----------------------------------------------------------
>    10== Z68193   1 human Red Opsin <>[]
-----MAQQWSLQRLAGRHPQDSYEDSTQSSI-FTYTNSNS-------------------
--TRGPFEGPNY------------------------HIAPRWV-----------------
--YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STI
SIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFD
AKLAIVGIAFSWIWSAVW-TAPPIFG-WSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVL
MVTCCIIPLAIIMLCYLQVWLAI----RAVAKQQK-------------------------
--------------ESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH
PLMAALPAYFAK-------SATIYNPVIYVFMNRQFRNCIL-QLF-----------GKK-
VDDGS--ELSSASKTEVSSV---SSVSPA-------------------------------
----------------------------------------------------------
>    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
-----MTEAWNVAVFAARRSRDD-DDTTRGSV-FTYTNTNN-------------------
--TRGPFEGPNY------------------------HIAPRWV-----------------
--YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STI
SVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFD
SKLAIIGIVFSWVWAWGW-SAPPIFG-WSRYWPHGLKTSCGPDVFSGSVELGCQSFMLTL
MITCCFLPLFIIIVCYLQVWMAI----RAVAAQQK-------------------------
--------------ESESTQKAEREVSRMVVVMIVAFCICWGPYASFVSFAAANPGYAFH
PLAAALPAYFAK-------SATIYNPVIYVFMNRQFRNCIM-QLF-----------GKK-
VDDGS--EASTTSRTEVSSVS-NSSVAPA-------------------------------
----------------------------------------------------------
>    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
-----MA-AWEAAFAARRRHEE--EDTTRDSV-FTYTNSNN-------------------
--TRGPFEGPNY------------------------HIAPRWV-----------------
--YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STI
SVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFD
GKLAVAGILFSWLWSCAW-TAPPIFG-WSRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVL
MVTCCFFPLAIIILCYLQVWLAI----RAVAAQQK-------------------------
--------------ESESTQKAEKEVSRMVVVMIVAYCFCWGPYTFFACFAAANPGYAFH
PLAAALPAYFAK-------SATIYNPIIYVFMNRQFRNCIL-QLF-----------GKK-
VDDGS--EVST-SRTEVSSVS-NSSVSPA-------------------------------
----------------------------------------------------------
>    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
-----MS-----------------SNSSQAP-------PNG-------------------
--TPGPFDGPQW-----------------------PYQAPQST-----------------
--YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSV
SLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQ
RRHAVSGCAFTWGWALLW-SAPPLLG-WSSYVPEGLRTSCGPNWYTGGSNN--NSYILSL
FVTCFVLPLSLILFSYTNLLLTL----RAAAAQQK-------------------------
--------------EADTTQRAEREVTRMVIVMVMAFLLCWLPYSTFALVVATHKGIIIQ
PVLASLPSYFSK-------TATVYNPIIYVFMNKQFQSCLL-EMLCCGY------QPQR-
TGKAS--PGTPGPHADVTAAGLRNKVMPAHPV----------------------------
----------------------------------------------------------
>    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
-----MES-----------------GNVSSSL---FGNVST-------------------
--ALRPEARLSA------ETRLLGWNVPP---EELRHIPEHWLTYPE----------PPE
SMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPI
FIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMT
HGKAIAMIIFIYMYATPW-VVACYTETWGRFVPEGYLTSCTFDYLT--DNFDTRLFVACI
FFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------
---MNVESLRS--NVDKNKETAEIRIAKAAITICFLFFCSWTPYGVMSLIGAFGDKTLLT
PGATMIPACACK-------MVACIDPFVYAISHPRYRMELQKRCPWLAL-----------
NEKAP--ESSAVASTSTTQEP--QQTTAA-------------------------------
----------------------------------------------------------
>    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
-----MEY-----------------HNVSSVL----GNVSS-------------------
--VLRPDARLSA------ESRLLGWNVPP---DELRHIPEHWLIYPE----------PPE
SMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPI
FIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMT
HGKAIAMIIFIYLYATPW-VVACYTESWGRFVPEGYLTSCTFDYLT--DNFDTRLFVACI
FFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------
---MNVDSLRS--NVDKSKEAAEIRIAKAAITICFLFFASWTPYGVMSLIGAFGDKTLLT
PGATMIPACTCK-------MVACIDPFVYAISHPRYRMELQKRCPWLAI-----------
SEKAP--ESRAAISTSTTQEQ--QQTTAA-------------------------------
----------------------------------------------------------
>    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
-----ME-----------------------PL----CNASE-------------------
-PPLRPEAR-SSG---NGDLQFLGWNVPP---DQIQYIPEHWLTQLE----------PPA
SMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--API
F--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMT
FTKAVIMNIIIWLYCTPW-VVLPLTQFWDRFVPEGYLTSCSFDYLS--DNFDTRLFVGTI
FFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKK------------------------
---MNVESLRS--NVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSLLT
QGATMIPACTCK-------LVACIDPFVYAISHPRYRLELQKRCPWLGV-----------
NEKSG--EISSAQST-TTQEQ--QQTTAA-------------------------------
----------------------------------------------------------
>added1
MNGTPEGDNFYVAPFSNKTGLARSPYEYPQYYLAKEPWKYSALAAYMFFLILVGFPVNFLTLSFVTVQHKKLWRTPLNYILLNLAMANLFMVLFGFTVTMYTSMNGYFVEFGPTMCSIEGFFATLGGEVALWSLVVLAIIERYIVICKPMGNFRFGNTHAIMGVAAFTWIMALACAAPPLVGWSRYIPEGMQCSCGPDYYTLNQPNFNNESYVVYMAFVVHFLVSPFVIIFFCYGRLLSCTVKEAAAAQQESASTQAKAEKEVTRMVVLMVIIGFLVCWVPYASVAFYIFTHQGSDFGATFMTLPAFFEAKSSALYNPVAIYILMNKQFRNCMITTVLCCGKNPLGPDDESGASHTSKTEVSSVSTRSPVSPA
