pilercr v1.06
By Robert C. Edgar

/stor/work/Wilke/rybarskj/final-mempads/data/tacc-datasets/batch0043/chunk004317.fna: 21 putative CRISPR arrays found.



DETAIL REPORT



Array 1
>MGYG000166779_43

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
         4      36   100.0      30         CCG    ....................................    ACGGGTGCACTTTCGATGTCGCACTTTTTG
        70      36   100.0      29  GCACTTTTTG    ....................................    TATACATCATCGTACATATAAGCATACAG
       135      36   100.0      29  AAGCATACAG    ....................................    GAAAAATCAGAGCCCAAAGTACGAGTAAC
       200      36   100.0      29  TACGAGTAAC    ....................................    CCAGTTCCCGAATTTGATGCTCTTGGCAT
       265      36   100.0      29  CTCTTGGCAT    ....................................    ACTTACAACAACAACAATAACAATAAATG
       330      36   100.0      30  ACAATAAATG    ....................................    ATACGTGTGCTCTATATACGCACCCATTGG
       396      36   100.0      30  CACCCATTGG    ....................................    GGAGCTCTTTCGATGTCGCACTTTCTGAAG
       462      36   100.0      29  CTTTCTGAAG    ....................................    CGTGCTCGCTTTGAATTTGTAGAACCCGA
       527      36   100.0      30  TAGAACCCGA    ....................................    TCTCGACACTATTTCTAACGAGGAAATTAA
       593      36   100.0      29  AGGAAATTAA    ....................................    GCGCTGAGAAGTTACCACCGACCGCTTGA
       658      36   100.0      29  GACCGCTTGA    ....................................    AATACTAAACCAAGATTGCCAAAGGTCCA
       723      36   100.0      29  CAAAGGTCCA    ....................................    AGATGATCTACGCTCAATATTAGAAAAAC
       788      36   100.0      30  TTAGAAAAAC    ....................................    GTATCTGCGGAACAAGTACAGAGAACATGA
       854      36   100.0      30  GAGAACATGA    ....................................    CGAACCTAATACGGCTTTAGCCTTTTTGCA
       920      36   100.0      30  CCTTTTTGCA    ....................................    AATGAGTACCAAAAGCAAAGAACAAATCGA
       986      36   100.0      30  AACAAATCGA    ....................................    TATATTTTTGTGCGTTACCCGTCCGTGAGG
      1052      36   100.0      29  GTCCGTGAGG    ....................................    TTACTTACGACTATTACGACCAGGTGAAC
      1117      36   100.0      29  CCAGGTGAAC    ....................................    ATAATTATAATCGGAAATCAAGCGGATAA
      1182      36   100.0      29  AAGCGGATAA    ....................................    TTTGAATTAGATTCGGCAACCTTAGCATT
      1247      36   100.0      29  CCTTAGCATT    ....................................    TTTTCATCATATTCATAAGAATAGCGACC
      1312      36   100.0      30  AATAGCGACC    ....................................    CCATACGCTCCTTGGTGGTCTTGGTAAGGA
      1378      36    94.4          TTGGTAAGGA    .................A..........C.......    TTTTGTGGCT
==========  ======  ======  ======  ==========    ====================================
        22      36              29                GTTGTGGTTTGATGTAGGAATCAAAAGATATACAAC


Array 2
>MGYG000242676_4

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
     60549      36    94.4      29  TTTGATTCGG    ..........................G.C.......    TTGTTCTTTTATATGTGTACATAGCTAGA
     60614      36   100.0      28  CATAGCTAGA    ....................................    ACCTCCTTTGGATTTTCAGCAAATCAGG
     60678      36    97.2      26  GCAAATCAGG    .............................T......    ATACTGCTTGTTCTGTAAAAATTTTG
     60740      36    94.4      26  AAAAATTTTG    .........T.........................G    GAGTTCTCCAACCGTTTGCGGCAATA
     60802      36   100.0      27  TGCGGCAATA    ....................................    ACGGTTGAATCAATGAGAAATGTTGTG
     60865      36   100.0      27  AAATGTTGTG    ....................................    TGATATTGACGGTGACCTGATTAACCG
     60928      36   100.0          TGATTAACCG    ....................................    TGTCAATCACATCTGTGACCGCAAGG
==========  ======  ======  ======  ==========    ====================================
         7      36              27                TTTAATAACCCTATATAATTTCTACTATTGTAGATA


Array 3
>MGYG000242676_4

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
    157550      36   100.0      30  AATCGTGTTG    ....................................    GAGGGGTTGTCCTTCATGTACTCTTTACCT
    157616      36   100.0      30  CTCTTTACCT    ....................................    ATACAAATGCATTGCCGAGGACAGTGTTTT
    157682      36   100.0      30  ACAGTGTTTT    ....................................    TATACGGTTTGCCCGTGCAGTCTTGTACAA
    157748      36   100.0      30  TCTTGTACAA    ....................................    GGGCTTATACTCTGACTTTCAACAAGTTAG
    157814      36   100.0      30  AACAAGTTAG    ....................................    CCGATTTTTTCATTGCCAAAACGATATTTT
    157880      36   100.0          ACGATATTTT    ....................................    CTCAAATTG
==========  ======  ======  ======  ==========    ====================================
         6      36              30                GTTTTACTACCTTATAGATTTACACTATTCTCAAAC


Array 4
>MGYG000273829_14

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
     15191      36   100.0      30  ATACATTGTA    ....................................    ATCGCTGAACCTACAACAGACGCAAGAACA
     15257      36   100.0      30  CGCAAGAACA    ....................................    GATATTGTCATACCTAAGTAAATAGGTGCG
     15323      36   100.0      30  AATAGGTGCG    ....................................    TACAATCAGTCTATAACATTTGCAACTACG
     15389      36   100.0      29  TGCAACTACG    ....................................    TATTATAGACAGCAAGCAACTTGATGTAT
     15454      36   100.0      30  CTTGATGTAT    ....................................    CTTGAATTTGGGGAGATGTTCTCAGCTGGT
     15520      36   100.0      30  CTCAGCTGGT    ....................................    AAAGTTTGCTGACAGGGACATTCAAAGCCG
     15586      36   100.0      30  TTCAAAGCCG    ....................................    AAACCTGTCTGTCCGATCTGCACCATATAT
     15652      36   100.0      30  CACCATATAT    ....................................    ACCGCTATTGCGCTGCAGCATCCACAAGGA
     15718      36   100.0      30  TCCACAAGGA    ....................................    GCATCTTCCTGCGCTCTCTCTGAAAACATG
     15784      36   100.0      30  TGAAAACATG    ....................................    CGAAGCCTAAAGCTCATTTCGCTTAGGCTT
     15850      36   100.0      30  GCTTAGGCTT    ....................................    AAACATGGTGTTGATGTCAAAGAGCTGTAT
     15916      36   100.0      30  AGAGCTGTAT    ....................................    TGGGCGAATATAAATTCCATCGGTGGCAAG
     15982      36   100.0      30  CGGTGGCAAG    ....................................    AATATTGGATGATGTGTATGGCATTTTACT
     16048      36   100.0      30  GCATTTTACT    ....................................    AGTGTATATGTGAACCCTGCTCCCAGTGCT
     16114      36   100.0      30  TCCCAGTGCT    ....................................    AAAGACCGGAGCAAAGATGTCCGGGAGCCG
     16180      36   100.0      30  CCGGGAGCCG    ....................................    TGAAAGTGGTGTAATTGTTATAACTCATTG
     16246      36   100.0      30  TAACTCATTG    ....................................    AGACAACAGGTGTGGAAGCATATGTCTTTA
     16312      36   100.0      30  TATGTCTTTA    ....................................    TGCTGCATAGGTGTGTATTTTCTCATGTCG
     16378      36   100.0      30  TCTCATGTCG    ....................................    GGTAATGGTGGTGGCGGTTATACCGCAACT
     16444      36   100.0      30  TACCGCAACT    ....................................    ATGGTCGGGGCTACATATTACGCCGCAGTA
     16510      36   100.0     624  CGCCGCAGTA    ....................................    CGTGAGGTCTCCGACCGTGAAAACAGTTCTGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATACGAACTTAGTACCCTTTTCTGGGCGGCATGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATCCGCAGGTGCTACCGCTGTTATACTCTGTTGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATCGTAAATCGTTGGCGAAACGCTACCAACTGGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATCCTCGGTCTGCTCTAACAGATCCCCCAAGTGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATACAGAGAAAGAAAGAGAGATTAACGACTACGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATTGAAACGGAGTGGACAGGTAAAGGAATGGGGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATTGCGGTCCCTTGGTTCCGTCAACAACATCAGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATTGTCCTATTCCCTTTTATGCTGCGTGTATAGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATAATACAAGCATAAAGAACGAACCGCAACGG
     17170      36   100.0          ACCGCAACGG    ....................................    AGGGAACGGT
==========  ======  ======  ======  ==========    ====================================
        22      36              58                GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


Array 5
>MGYG000273829_14

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
     16576      36   100.0      30  AAACAGTTCT    ....................................    ACGAACTTAGTACCCTTTTCTGGGCGGCAT
     16642      36   100.0      30  TGGGCGGCAT    ....................................    CCGCAGGTGCTACCGCTGTTATACTCTGTT
     16708      36   100.0      30  ATACTCTGTT    ....................................    CGTAAATCGTTGGCGAAACGCTACCAACTG
     16774      36   100.0      30  CTACCAACTG    ....................................    CCTCGGTCTGCTCTAACAGATCCCCCAAGT
     16840      36   100.0      30  TCCCCCAAGT    ....................................    ACAGAGAAAGAAAGAGAGATTAACGACTAC
     16906      36   100.0      30  TAACGACTAC    ....................................    TGAAACGGAGTGGACAGGTAAAGGAATGGG
     16972      36   100.0      30  AAGGAATGGG    ....................................    TGCGGTCCCTTGGTTCCGTCAACAACATCA
     17038      36   100.0      30  AACAACATCA    ....................................    TGTCCTATTCCCTTTTATGCTGCGTGTATA
     17104      36   100.0      30  TGCGTGTATA    ....................................    AATACAAGCATAAAGAACGAACCGCAACGG
     17170      36   100.0          ACCGCAACGG    ....................................    AGGGAA
==========  ======  ======  ======  ==========    ====================================
        10      36              30                GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


Array 6
>MGYG000153268_1

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                   Spacer
==========  ======  ======  ======  ==========    =====================================    ======
    131525      37    97.3      26  CAAAATAAGG    .................A...................    ATCCCCCTTTCACATGATACACTTGT
    131588      37   100.0      27  ATACACTTGT    .....................................    CACTGAACATTCGCTTTTCTGCCATTT
    131652      37   100.0          TCTGCCATTT    .....................................    AAAGAGAGGTATTTATTATGGCTGA
==========  ======  ======  ======  ==========    =====================================
         3      37              26                GGTTAAATAATAAGAAAGAATTTCTACTAGTGTAGAT


Array 7
>MGYG000248147_1

       Pos  Repeat     %id  Spacer  Left flank    Repeat                              Spacer
==========  ======  ======  ======  ==========    ================================    ======
     96707      32    96.9      35  TTGATGATCT    .......................A........    CGGTTCTGTCTTGACCATTATGTTATAATCTAACC
     96774      32   100.0      35  TAATCTAACC    ................................    CATAAGTTATACCTCCCGATTATGCTACAGCCGGA
     96841      32   100.0      35  TACAGCCGGA    ................................    GTATTATTACAAACCCACCTTATAAATATGCTTAT
     96908      32   100.0          ATATGCTTAT    ................................    TGCAAAATAT
==========  ======  ======  ======  ==========    ================================
         4      32              35                CTGGCAACCCACTTGTCTACGAGGATTGCAAC


Array 8
>MGYG000248147_2

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                 Spacer
==========  ======  ======  ======  ==========    ===================================    ======
    103336      35    91.4      31  GCAGGTGCTT    ---................................    AATGAATTGGTGTGGAGCTTACTATTTACAA
    103402      35    97.1      33  CTATTTACAA    ...........................G.......    AGAATGATTAAATCAAGACACACAGCAATTTCG
    103470      35    97.1          AGCAATTTCG    ..................................T    GCGAAAAAA
==========  ======  ======  ======  ==========    ===================================
         3      35              32                AAATTTTCGTCCCCGCTTGGGGATGGGTTGGTTCC


Array 9
>MGYG000279548_5

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
    119282      36   100.0      30  TGAATTTGAG    ....................................    TTTGTCAGGTGGCTTTTTGGCATAATGTCG
    119348      36   100.0      30  CATAATGTCG    ....................................    TCTATTATGCGTAGTTTCCCATCTTTTAAT
    119414      36   100.0      30  ATCTTTTAAT    ....................................    TGGAGCTCATCCGAAATCATGTTCCAAAAC
    119480      36   100.0      31  GTTCCAAAAC    ....................................    AGAAGTAAATGGAAATAGTGAACAGATTAAT
    119547      36   100.0      30  ACAGATTAAT    ....................................    ATTATCTTCACCATTTACAATCAAGTTGTT
    119613      36   100.0      30  TCAAGTTGTT    ....................................    AGAAATGTCACTATTGAAAGCTGTACATTC
    119679      36   100.0      30  CTGTACATTC    ....................................    AATAATTCAGAGGGAAGAAACATTACTATT
    119745      36   100.0      30  CATTACTATT    ....................................    AATAATTCAGAGGGAAGAAACATTACTATT
    119811      36   100.0      30  CATTACTATT    ....................................    AATAATTCAGAGGGAAGAAACATTACTATT
    119877      36   100.0      30  CATTACTATT    ....................................    GCTAAAACAGTAACAGATACACTTATGGTC
    119943      36   100.0      30  ACTTATGGTC    ....................................    CTATCCATACAGAGAGACAAGCAATGGCTC
    120009      36   100.0      30  GCAATGGCTC    ....................................    AGAATAAACAATGATTGACAACAAAACAAT
    120075      36   100.0      30  ACAAAACAAT    ....................................    CGCAGACAGCGGGCTGACCACCGGAAATCT
    120141      36   100.0          CCGGAAATCT    ....................................    TTCTGGCATA
==========  ======  ======  ======  ==========    ====================================
        14      36              30                GTTTGAGAATGATGTAAAAGTAAATGGTACTCAAAC


Array 10
>MGYG000032586_158

       Pos  Repeat     %id  Spacer  Left flank    Repeat                               Spacer
==========  ======  ======  ======  ==========    =================================    ======
        56      33   100.0      34  GCCCGTGTGT    .................................    GCACGGAACAAATGGTTCAATTGCCGCATATCTT
       123      33   100.0      34  CGCATATCTT    .................................    CATGTGATGTTCTTGCCACATACTGGGAGACACT
       190      33   100.0      36  GGGAGACACT    .................................    CGCACGCTCTATCGATATCTGATGCTATCATATATC
       259      33   100.0      35  ATCATATATC    .................................    GATATGCTGACGGAGTATTCCAGTCTTTACCAGAC
       327      33   100.0      35  TTTACCAGAC    .................................    GTCAGCAAAGTTACGATTATGAAAAGACAATTTTT
       395      33   100.0      35  GACAATTTTT    .................................    GACTTGTTGGCTACGTCAGTCGAATCTCTTGCAAT
       463      33   100.0      34  CTCTTGCAAT    .................................    TCAAGCAGTTCGCGGGCGACAACTCGAGCAATAA
       530      33   100.0      33  CGAGCAATAA    .................................    ACTCCAAATGGTGGATAATATAGGTAATAAGTA
       596      33   100.0      35  GTAATAAGTA    .................................    CTGGGCTGTCAGAGGTGACAATAGGCGGTTGTGGG
       664      33   100.0      34  CGGTTGTGGG    .................................    CTAAATCCTCATTGTCAGAATCAACCACATGGGC
       731      33   100.0          CCACATGGGC    .................................    TGCGCAAAGT
==========  ======  ======  ======  ==========    =================================
        11      33              34                ATTTCAATCCACGCTCCCCGCACGGGGAGCGAC


Array 11
>MGYG000288428_19

       Pos  Repeat     %id  Spacer  Left flank    Repeat                              Spacer
==========  ======  ======  ======  ==========    ================================    ======
     36680      32   100.0      34  CATTTTTGCC    ................................    CATTAATCTGGACTGTAGACTTTAAAATATCACC
     36746      32   100.0      34  AAATATCACC    ................................    AACATGGCGCAGAACACTTGCGCATTACAGAACA
     36812      32   100.0      33  TTACAGAACA    ................................    ATATAGTTCAGCAGGAACATCCGCACCAGAATA
     36877      32   100.0      34  CACCAGAATA    ................................    GATACGAGCAGGAACCGCAGATACCACAATAAAA
     36943      32   100.0      34  CACAATAAAA    ................................    ACAGATGCAGAAACTTAGTGTTGAAGTCCTGGAG
     37009      32   100.0      34  AGTCCTGGAG    ................................    TCTTGAAGCGGCAGTGAGATGTTGCATCGTCACA
     37075      32   100.0      34  CATCGTCACA    ................................    ATGAAGCAAAGAGTATCAGCTTACGAGACAGCTG
     37141      32   100.0      35  GAGACAGCTG    ................................    ACGACATAGCCTACACAAAGGCAAATGCCTACGAT
     37208      32   100.0      34  TGCCTACGAT    ................................    CGTAATCTCAACTATATCGCGACTGGAAATCATT
     37274      32   100.0          GGAAATCATT    ................................    AACTGATATG
==========  ======  ======  ======  ==========    ================================
        10      32              34                GTCGCTCCTCTTGTAGGAGCGTGGATTGAAAT


Array 12
>MGYG000288428_52

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
     20576      36   100.0      30  CGCAATCGCA    ....................................    GGTTGTGATAATATCACATTATATGTAACT
     20642      36   100.0      29  ATATGTAACT    ....................................    CTTATGAATAGTTTAGTTAAACAGGCAAC
     20707      36   100.0      30  AACAGGCAAC    ....................................    AGATTAATTACATTTGCAAGCGGTGAACAA
     20773      36   100.0      30  CGGTGAACAA    ....................................    TTTCAATATCATTCATTGTTTTTTCTAGTT
     20839      36   100.0      30  TTTTCTAGTT    ....................................    ACGGAATACAATAATTTTTCGATTTGCTAT
     20905      36   100.0      30  GATTTGCTAT    ....................................    TCAACTGTTCTTTGATGAAATGGTCGAGAG
     20971      36   100.0      30  TGGTCGAGAG    ....................................    TTCTCCTTTTTCTTTAAATTTTTTATTTAA
     21037      36   100.0      30  TTTTATTTAA    ....................................    GAAATTGTCATGCCTAAGTAAATAGGTGTA
     21103      36   100.0      30  AATAGGTGTA    ....................................    TACCACCATCTACTTCCGTTATGTCCAAGT
     21169      36   100.0      30  ATGTCCAAGT    ....................................    TACAGCGGTATGAAATGAACCTTTTGAGGA
     21235      36   100.0      30  CTTTTGAGGA    ....................................    ACCTGTGTTATGTCTACTGTAACGCCATCA
     21301      36   100.0      30  AACGCCATCA    ....................................    GATTTTTTTGTACCCAACTAACTTAGTCAT
     21367      36   100.0      29  ACTTAGTCAT    ....................................    ATGTACGTTTACAGTTGTGTCTTGGTACT
     21432      36   100.0          TCTTGGTACT    ....................................    AGGGAACGGAA
==========  ======  ======  ======  ==========    ====================================
        14      36              29                GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


Array 13
>MGYG000272681_3

       Pos  Repeat     %id  Spacer  Left flank    Repeat                              Spacer
==========  ======  ======  ======  ==========    ================================    ======
     36105      32   100.0      35  TTTTAGGTAA    ................................    CGGAGGATATCATTGGTCTGGTCTGCAATATGTGG
     36172      32   100.0      33  CAATATGTGG    ................................    AATATCAAAAATTATGTAGTAGAGATGATTACA
     36237      32   100.0      33  GATGATTACA    ................................    AAGGTTCTGTGTTCATTGGAAAACGCGGTCGTG
     36302      32   100.0      34  CGCGGTCGTG    ................................    CATATTCGCACAGTTGTAACTGCCCGGTATGCAA
     36368      32   100.0      36  CGGTATGCAA    ................................    ATGGAGGCTTTTTCAAAAAATTATTATGCTTTTTTC
     36436      32   100.0      33  TGCTTTTTTC    ................................    GATATGCAAACCATTGTTAACAATTTTGATAGA
     36501      32   100.0      34  TTTTGATAGA    ................................    TGTGTTATTCACAACAATCGTGAATATTGGTTAG
     36567      32   100.0      33  TATTGGTTAG    ................................    TACTTGAAAGCCAGATAGTTGCCATGCGTGGCA
     36632      32   100.0      34  ATGCGTGGCA    ................................    GGGATTATGCCGATTTCACGCACGCATTTTTACA
     36698      32   100.0      33  CATTTTTACA    ................................    AGTTATCAACATCCTTTTTTCTGACATCATAAA
     36763      32   100.0      33  ACATCATAAA    ................................    AATTTCGTTGTAATTCTTTAGCTTCTGTTTTGA
     36828      32   100.0      35  TCTGTTTTGA    ................................    GGAAAACCCGGGCAGAATCAGCAGAGAAAATGCTC
     36895      32   100.0      32  GAAAATGCTC    ................................    GACATTTTTACGGAATGAGCGAGCAGAATAAA
     36959      32   100.0      35  GCAGAATAAA    ................................    GCATGATGGCAGAAATAAAGGCAAAAAAAATAGAT
     37026      32   100.0      34  AAAAATAGAT    ................................    GGTTCAAACTGTGGTGCATTTTTACTGTAATTTT
     37092      32   100.0      34  CTGTAATTTT    ................................    CATCTGTGACCAGCATTGGAGCCACAATCGCAGA
     37158      32   100.0      37  CAATCGCAGA    ................................    CGTCAACCTCAAATGTAAGGATGATGCCTTGTCCATT
     37227      32   100.0      35  CTTGTCCATT    ................................    CAGAGGACACTTACCGTATAGTAAATGCAATTAAC
     37294      32   100.0      35  TGCAATTAAC    ................................    ATTGTCTTTTTTGCTTCTGTTTTGGAATCCTCTGT
     37361      32   100.0      34  AATCCTCTGT    ................................    AGTGAAGATCAGAAGCGCATGATCACAATTTACA
     37427      32   100.0      35  ACAATTTACA    ................................    AAAGGGCAGACTTCAATGTTTGCCCTTATATTTTT
     37494      32   100.0      33  TTATATTTTT    ................................    TCTGTAAAAGGGTATGCATTTTCAATGTCTCCA
     37559      32   100.0      34  AATGTCTCCA    ................................    AAGCAATCTGCTTGAAAATATTGCAAAGTTCCTT
     37625      32   100.0      36  AAAGTTCCTT    ................................    GAACAGTCAGAAAAAGAGTATACCAGCGAAGAAAAA
     37693      32   100.0      35  CGAAGAAAAA    ................................    TGAAATTGGGACTGGATTCAAAAAGCACGATTGAT
     37760      32   100.0      33  CACGATTGAT    ................................    AAAGCAAAAGGATTGACGCAAGTTGAGTTTGGT
     37825      32   100.0          TGAGTTTGGT    ................................    AGCAAAAATG
==========  ======  ======  ======  ==========    ================================
        27      32              34                CTTTCAATCCACGCTCCTACAAGAGGAGCGAC


Array 14
>MGYG000272681_3

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
     46488      36   100.0      29  TCCGTTCCCT    ....................................    TTCTGCGATTGCGTTAGTGTTCATGTGGT
     46553      36   100.0      30  TTCATGTGGT    ....................................    CTATATGGATCAGAATTGCCCGGATGCACC
     46619      36   100.0      30  CGGATGCACC    ....................................    CGATAGTGACGAGATAGTTTATGTACTCGT
     46685      36   100.0      30  ATGTACTCGT    ....................................    AGAAGACTTAAAAGGCTGGAAGTGCTGGGG
     46751      36   100.0      30  AGTGCTGGGG    ....................................    TTAGCAGACAAAACAGAATATCCAGACTTT
     46817      36   100.0      30  TCCAGACTTT    ....................................    TCTTGAGGACGGATATTGCATCATGGCAAC
     46883      36   100.0      29  TCATGGCAAC    ....................................    ATGTGTAACATGTCTGGTAGACCCGCCGA
     46948      36   100.0      30  GACCCGCCGA    ....................................    GTAAATATAGTATAATATGAGTGTAGAAAA
     47014      36   100.0      30  GTGTAGAAAA    ....................................    TGAAAATCCTACAAGTACGAAATCTATGTG
     47080      36    94.4          AATCTATGTG    .........................A........C.    CCTGGTCT
==========  ======  ======  ======  ==========    ====================================
        10      36              29                ATTATAACATACCAAGTAATAACCGGGAACTACAGC


Array 15
>MGYG000272681_85

       Pos  Repeat     %id  Spacer  Left flank    Repeat                            Spacer
==========  ======  ======  ======  ==========    ==============================    ======
      1736      30   100.0      34  GGGACGCATC    ..............................    TTTTTCCTTATCTCCTTTACACTGTGTTATTTTG
      1800      30   100.0      35  TGTTATTTTG    ..............................    CCTGGCAACAGTAATTTTCGCCAATAACGGTAGAT
      1865      30   100.0      33  AACGGTAGAT    ..............................    TATAAGGACAATGTAACAACCTTTGTGGAAAGC
      1928      30   100.0      33  TGTGGAAAGC    ..............................    TTTAGGAGATGGAGTCTTTATTACTGGTGCTTC
      1991      30   100.0      35  CTGGTGCTTC    ..............................    CGTTCTCTCCGCTTGCTTCTGGAAAACTGTTTTTC
      2056      30   100.0      33  ACTGTTTTTC    ..............................    GGCGGCAAATTTACAGTATTTAGCCGCAAATAA
      2119      30   100.0      33  CCGCAAATAA    ..............................    CTGTAAAGAAATTGATGACTATCTTGCCTACGC
      2182      30   100.0      34  TTGCCTACGC    ..............................    TATCTGCCGCCGCTGTTCCAAGAATTTCCTCGGT
      2246      30   100.0      38  TTTCCTCGGT    ..............................    GATTAAATCATGGCAAAAGAATTTGTTTACAGCAAGAC
      2314      30   100.0      34  ACAGCAAGAC    ..............................    CAAATTCCTGAAAGAATCCAAGCCATTTCTGTTT
      2378      30   100.0      33  ATTTCTGTTT    ..............................    ATACATCTAAGGAGTTTTGCAAGAAAGTGTAGG
      2441      30   100.0      34  AAAGTGTAGG    ..............................    CAGAACAGCACAGAATCCGGAATGCATGGAGAAG
      2505      30   100.0      33  CATGGAGAAG    ..............................    GCTTCTATCTACCATCTTTTCCTCCACTCTATG
      2568      30   100.0      34  CCACTCTATG    ..............................    ATTCAACACCTCACGTTTTGTTGAAAACATCTCT
      2632      30   100.0      34  AAACATCTCT    ..............................    GCAGACCAATGGCAGCACGGATGTGACAATCGAG
      2696      30   100.0      33  GACAATCGAG    ..............................    AGAAGTACAAAAAGGAATCGTACAGACGCAGGC
      2759      30    96.7      33  AGACGCAGGC    .......................A......    TTACTTTCAGCGGATCGTCCAGCCCCCGGAAGT
      2822      30   100.0      33  CCCCGGAAGT    ..............................    TAAGATCACAGAATATCCGGAGCATCCGGAGAA
      2885      30   100.0      32  ATCCGGAGAA    ..............................    GTGAAAAAGGCAAGTAAAATTCTGAGCCTGGT
      2947      30   100.0      33  TGAGCCTGGT    ..............................    CTGAGTGGGGCGTGAGCAAGATATTTGCCATTA
      3010      30   100.0      32  TTTGCCATTA    ..............................    CTGGCCGGGAACAGTTCTGACGATTCCAGGAT
      3072      30   100.0      35  ATTCCAGGAT    ..............................    TTGTAGGCGGTTTTGAAAGCTATCTGAGCAGAAAT
      3137      30   100.0      33  GAGCAGAAAT    ..............................    TGAAAAAGACTTTCTCGCAGCCAAAATAACGTT
      3200      30   100.0      34  AAATAACGTT    ..............................    CCAGGAATGCGGATGCACGATAACCGATCAGTAC
      3264      30   100.0      33  CGATCAGTAC    ..............................    GGAAAAACAGTATGCTCCTGAAGAAGCGTGGAT
      3327      30   100.0          AAGCGTGGAT    ..............................    GGCAAATTTA
==========  ======  ======  ======  ==========    ==============================
        26      30              33                ATTTCAACTCACGCCCTCACGGAGGGCGAC


Array 16
>MGYG000272681_134

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
      5803      36   100.0      30  AGTTATGTTA    ....................................    ATAAGCGGGGAAAAGCCTGAAAGCAAATTC
      5869      36   100.0      30  AAGCAAATTC    ....................................    TGATTCCTACGTTTCAGTAGGGTTCAATGA
      5935      36   100.0      30  GGTTCAATGA    ....................................    GCAAGATACAGCCAGCATCACAAACCGAAC
      6001      36   100.0      29  CAAACCGAAC    ....................................    CGACCACAGTATACACATACTTTTTCTGT
      6066      36   100.0      30  CTTTTTCTGT    ....................................    TGTCTGACGGTCAATAAAATATTCAGCTGC
      6132      36   100.0      30  ATTCAGCTGC    ....................................    TGTTATACATTACCGTATCCTTTCCGCACA
      6198      36   100.0      30  TTTCCGCACA    ....................................    TCACTGGATATTCCCGATGTACTTACTCCC
      6264      36   100.0      30  ACTTACTCCC    ....................................    ACCCGTCATAGCAGAAAGTACAGACGCCCA
      6330      36   100.0      29  CAGACGCCCA    ....................................    TAACTGACAAGTTCAAATCATGATCTTTA
      6395      36   100.0      30  ATGATCTTTA    ....................................    CGATAACAATATCATTTGTGGATAGCCTTT
      6461      36   100.0      30  GATAGCCTTT    ....................................    CGGTGGTCGGTGTTCTTGCCGCTTCTGTCG
      6527      36   100.0      30  GCTTCTGTCG    ....................................    TCGAAGATCGTTTATCAGCCGCAGATCATT
      6593      36   100.0      30  GCAGATCATT    ....................................    GCGTTCGGGAGACCCCTTTTCTTTCTCTGA
      6659      36   100.0      30  CTTTCTCTGA    ....................................    TTCGCTTCCGTGGTCTTTACCTCGAAATAT
      6725      36   100.0      29  CTCGAAATAT    ....................................    TAGTGTGCTTGACGAATTGATTGATGTGC
      6790      36   100.0      30  ATTGATGTGC    ....................................    TGATTATTCCGTGTCCGGTGGTCGTGCGTT
      6856      36   100.0      29  GTCGTGCGTT    ....................................    GACAAGTGCGCCCGCTAACAACCGCGCCT
      6921      36   100.0          AACCGCGCCT    ....................................    TCGAAGATCG
==========  ======  ======  ======  ==========    ====================================
        18      36              29                GTTTGAATACCATATATCTTTACATCATTCTCAAAC


Array 17
>MGYG000197636_2

       Pos  Repeat     %id  Spacer  Left flank    Repeat                               Spacer
==========  ======  ======  ======  ==========    =================================    ======
    145662      33    93.9      33  TAGTATTTAA    -...............T................    AGAAAACCGCATAAGGACCGATACCACATTACA
    145728      33   100.0      34  CCACATTACA    .................................    AACCCATTGTCGCTCTTGCGGTTCTAAACTTTCA
    145795      33   100.0      35  TAAACTTTCA    .................................    GGCTGAGGCGGAGAATGCCGCAAGCTGGGACTTTT
    145863      33   100.0          TGGGACTTTT    .................................    TGCAAAATAT
==========  ======  ======  ======  ==========    =================================
         4      33              34                GCTGGCAACCCACTTGCCTACGAGGATTGCAAC


Array 18
>MGYG000232241_150

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                      Spacer
==========  ======  ======  ======  ==========    ========================================    ======
      3832      40    92.5      34  CATATAGCAA    ..A..................................CC.    GAATTACATCGTATGCCAATACGCAGTTGCTTTT
      3906      40    97.5      41  AGTTGCTTTT    .....................................---    TGTACTACTATGCGGTATTCCATCTGAAGGATGGCGGCTAC
      3987      40    92.5          TGGCGGCTAC    GG............-......................--.    ATCACATTCA
==========  ======  ======  ======  ==========    ========================================
         3      40              37                AAGTTTCCGTCCCCTTTCGGGGAATCATTTAGAAAAT--A


Array 19
>MGYG000228320_130

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
      2594      36    91.7      30  TTTAAATCCA    .......A............T...........T...    TTTGAGAGAAATACATGAAACGAATATCTG
      2660      36   100.0      30  CGAATATCTG    ....................................    CAACAACACTAAAGGTAATGCGTGCCGACT
      2726      36   100.0      30  CGTGCCGACT    ....................................    TCTCTCGCTATCATTATTGTGTAGGCTACC
      2792      36    97.2      30  GTAGGCTACC    .........C..........................    TAGGGAACCAAAAATATAGATATACGGGAA
      2858      36   100.0          TATACGGGAA    ....................................    CTATCCAATT
==========  ======  ======  ======  ==========    ====================================
         5      36              30                GTTGGATGTACCTTTCTTTTATAGATGATTTACATC


Array 20
>MGYG000233437_34

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
     16822      36   100.0      30  ATACATTGTA    ....................................    CCGGCATATCCATAACCAAAATTGCTTTAG
     16888      36   100.0      30  ATTGCTTTAG    ....................................    AGCCAAAGGCAAGTGCTGAACCTAAACGTG
     16954      36   100.0      30  CCTAAACGTG    ....................................    CCATAGCACCTCACTTCTGTCCCCTGTTCT
     17020      36   100.0          CCCCTGTTCT    ....................................    TTGTGTTCT
==========  ======  ======  ======  ==========    ====================================
         4      36              30                GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


Array 21
>MGYG000233437_42

       Pos  Repeat     %id  Spacer  Left flank    Repeat                                  Spacer
==========  ======  ======  ======  ==========    ====================================    ======
         3      36   100.0      30          AT    ....................................    TTAAGTCTTTCAATGTCAAGAGAGCCGAAG
        69      36   100.0      29  AGAGCCGAAG    ....................................    AAAAGGAAGTATGAGAATAGCAGTAAAAG
       134      36   100.0      29  GCAGTAAAAG    ....................................    AAAAAACATTTATAGTTATTCAAAAACAG
       199      36   100.0      30  TCAAAAACAG    ....................................    AGATCCTGGGCAATCAGATCCTCAAAATAC
       265      36   100.0      30  CTCAAAATAC    ....................................    TTTAAGCTTTTGATGATTAGATCTGCAAGT
       331      36   100.0      30  ATCTGCAAGT    ....................................    ATAAAATCCCTGATATGAAAGTCCGACGTT
       397      36   100.0          GTCCGACGTT    ....................................    AGGGAACGGT
==========  ======  ======  ======  ==========    ====================================
         7      36              29                GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


SUMMARY BY SIMILARITY



Array          Sequence    Position      Length  # Copies  Repeat  Spacer  +  Consensus
=====  ================  ==========  ==========  ========  ======  ======  =  =========
    4  MGYG000273829_14       15191        2015        22      36      58  +  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
    5  MGYG000273829_14       16576         630        10      36      30  +  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
   12  MGYG000288428_52       20576         892        14      36      29  +  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
   14   MGYG000272681_3       46488         628        10      36      29  -  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
   20  MGYG000233437_34       16822         234         4      36      30  +  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
   21  MGYG000233437_42           3         430         7      36      29  +  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
                                                                              ************************************

   10  MGYG000032586_15          56         708        11      33      34  +  ATTTCAATCCACGCTCCCCGCACGGGGAGCGAC
   11  MGYG000288428_19       36680         626        10      32      34  -  ATTTCAATCCACGCT-CCTACAAGAGGAGCGAC
   13   MGYG000272681_3       36105        1752        27      32      34  +  CTTTCAATCCACGCT-CCTACAAGAGGAGCGAC
                                                                               ************** **  ** * ********

    1  MGYG000166779_43           4        1410        22      36      29  +  GTTGTGGTTTGATGTAGGAATCAAAAGATATACAAC
    9   MGYG000279548_5      119282         895        14      36      30  +  GTTTGAGAATGATGTAAAAGTAAATGGTACTCAAAC
   16  MGYG000272681_13        5803        1154        18      36      29  -  GTTTGAGAATGATGTAAAGATATATGGTATTCAAAC
                                                                              ***   *  *******    *  *  *   *  ***

    2   MGYG000242676_4       60549         415         7      36      27  +  --TTTAATAACCCTATATAATTTCTACTATTGTAGATA
    6   MGYG000153268_1      131525         164         3      37      26  +  GGTTAAATAATAAGAAAGAATTTCTACTAGTGTAGAT-
                                                                                ** *****    * * *********** ******* 

    3   MGYG000242676_4      157550         366         6      36      30  +  -----GTTTTACTACCTTATA-----GATTTACACTATTCTCAAAC
   19  MGYG000228320_13        2594         300         5      36      30  +  GTTGGATGTACCTTTCTTTTATAGATGATTTACATC----------
                                                                                    * *  **  *** **     ********            

    7   MGYG000248147_1       96707         233         4      32      35  +  -CTGGCAACCCACTTGTCTACGAGGATTGCAAC
   17   MGYG000197636_2      145662         233         4      33      34  +  GCTGGCAACCCACTTGCCTACGAGGATTGCAAC
                                                                               *************** ****************

    8   MGYG000248147_2      103336         166         3      35      32  +  AAATTTTCGTCCCCGCTTGGGGATGGGTTGGTTCC

   15  MGYG000272681_85        1736        1621        26      30      33  +  ATTTCAACTCACGCCCTCACGGAGGGCGAC

   18  MGYG000232241_15        3832         189         3      40      37  +  AAGTTTCCGTCCCCTTTCGGGGAATCATTTAGAAAATA



SUMMARY BY POSITION



>MGYG000166779_43

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    1  MGYG000166779_43           4        1410        22      36      29              GTTGTGGTTTGATGTAGGAATCAAAAGATATACAAC


>MGYG000242676_4

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    2   MGYG000242676_4       60549         415         7      36      27              TTTAATAACCCTATATAATTTCTACTATTGTAGATA
    3   MGYG000242676_4      157550         366         6      36      30       96559  GTTTTACTACCTTATAGATTTACACTATTCTCAAAC


>MGYG000273829_14

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    4  MGYG000273829_14       15191        2015        22      36      58              GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
    5  MGYG000273829_14       16576         630        10      36      30        -688  GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


>MGYG000153268_1

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    6   MGYG000153268_1      131525         164         3      37      26              GGTTAAATAATAAGAAAGAATTTCTACTAGTGTAGAT


>MGYG000248147_1

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    7   MGYG000248147_1       96707         233         4      32      35              CTGGCAACCCACTTGTCTACGAGGATTGCAAC


>MGYG000248147_2

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    8   MGYG000248147_2      103336         166         3      35      32              AAATTTTCGTCCCCGCTTGGGGATGGGTTGGTTCC


>MGYG000279548_5

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
    9   MGYG000279548_5      119282         895        14      36      30              GTTTGAGAATGATGTAAAAGTAAATGGTACTCAAAC


>MGYG000032586_158

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   10  MGYG000032586_15          56         708        11      33      34              ATTTCAATCCACGCTCCCCGCACGGGGAGCGAC


>MGYG000288428_19

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   11  MGYG000288428_19       36680         626        10      32      34              GTCGCTCCTCTTGTAGGAGCGTGGATTGAAAT


>MGYG000288428_52

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   12  MGYG000288428_52       20576         892        14      36      29              GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


>MGYG000272681_3

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   13   MGYG000272681_3       36105        1752        27      32      34              CTTTCAATCCACGCTCCTACAAGAGGAGCGAC
   14   MGYG000272681_3       46488         628        10      36      29        8597  ATTATAACATACCAAGTAATAACCGGGAACTACAGC


>MGYG000272681_85

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   15  MGYG000272681_85        1736        1621        26      30      33              ATTTCAACTCACGCCCTCACGGAGGGCGAC


>MGYG000272681_134

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   16  MGYG000272681_13        5803        1154        18      36      29              GTTTGAATACCATATATCTTTACATCATTCTCAAAC


>MGYG000197636_2

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   17   MGYG000197636_2      145662         233         4      33      34              GCTGGCAACCCACTTGCCTACGAGGATTGCAAC


>MGYG000232241_150

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   18  MGYG000232241_15        3832         189         3      40      37              AAGTTTCCGTCCCCTTTCGGGGAATCATTTAGAAAATA


>MGYG000228320_130

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   19  MGYG000228320_13        2594         300         5      36      30              GTTGGATGTACCTTTCTTTTATAGATGATTTACATC


>MGYG000233437_34

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   20  MGYG000233437_34       16822         234         4      36      30              GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT


>MGYG000233437_42

Array          Sequence    Position      Length  # Copies  Repeat  Spacer    Distance  Consensus
=====  ================  ==========  ==========  ========  ======  ======  ==========  =========
   21  MGYG000233437_42           3         430         7      36      29              GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT
