<recPhylo>
<spTree>
<phylogeny><clade>
<name>88</name>
<clade>
<name>87</name>
<clade>
<name>83</name>
<clade>
<name>79</name>
<clade>
<name>74</name>
<clade>
<name>68</name>
<clade>
<name>60</name>
<clade>
<name>45</name>
<clade>
<name>Metazoa</name>
</clade>
<clade>
<name>Choanoflagellata</name>
</clade>
</clade>
<clade>
<name>Filasterea</name>
</clade>
</clade>
<clade>
<name>46</name>
<clade>
<name>Rotosphaerida</name>
</clade>
<clade>
<name>Fungi</name>
</clade>
</clade>
</clade>
<clade>
<name>Amoebozoa</name>
</clade>
</clade>
<clade>
<name>Discoba</name>
</clade>
</clade>
<clade>
<name>75</name>
<clade>
<name>69</name>
<clade>
<name>61</name>
<clade>
<name>47</name>
<clade>
<name>Chlorophyta</name>
</clade>
<clade>
<name>Streptophyta</name>
</clade>
</clade>
<clade>
<name>Rhodophyta</name>
</clade>
</clade>
<clade>
<name>Glaucocystophyceae</name>
</clade>
</clade>
<clade>
<name>48</name>
<clade>
<name>Alveolata</name>
</clade>
<clade>
<name>Stramenopiles</name>
</clade>
</clade>
</clade>
</clade>
<clade>
<name>86</name>
<clade>
<name>85</name>
<clade>
<name>80</name>
<clade>
<name>76</name>
<clade>
<name>70</name>
<clade>
<name>49</name>
<clade>
<name>Firmicutes</name>
</clade>
<clade>
<name>Tenericutes</name>
</clade>
</clade>
<clade>
<name>62</name>
<clade>
<name>50</name>
<clade>
<name>Actinobacteria</name>
</clade>
<clade>
<name>DeinococcusThermus</name>
</clade>
</clade>
<clade>
<name>Chloroflexi</name>
</clade>
</clade>
</clade>
<clade>
<name>51</name>
<clade>
<name>Synergistetes</name>
</clade>
<clade>
<name>Fusobacteria</name>
</clade>
</clade>
</clade>
<clade>
<name>63</name>
<clade>
<name>52</name>
<clade>
<name>Caldiserica</name>
</clade>
<clade>
<name>Thermotogae</name>
</clade>
</clade>
<clade>
<name>Aquificae</name>
</clade>
</clade>
</clade>
<clade>
<name>84</name>
<clade>
<name>81</name>
<clade>
<name>71</name>
<clade>
<name>64</name>
<clade>
<name>53</name>
<clade>
<name>Lentisphaerae</name>
</clade>
<clade>
<name>Verrucomicrobia</name>
</clade>
</clade>
<clade>
<name>54</name>
<clade>
<name>Planctomycetes</name>
</clade>
<clade>
<name>Chlamydiae</name>
</clade>
</clade>
</clade>
<clade>
<name>Elusimicrobia</name>
</clade>
</clade>
<clade>
<name>77</name>
<clade>
<name>55</name>
<clade>
<name>Fibrobacteres</name>
</clade>
<clade>
<name>Gemmatimonadetes</name>
</clade>
</clade>
<clade>
<name>65</name>
<clade>
<name>56</name>
<clade>
<name>Bacteroidetes</name>
</clade>
<clade>
<name>Chlorobi</name>
</clade>
</clade>
<clade>
<name>Calditrichaeota</name>
</clade>
</clade>
</clade>
</clade>
<clade>
<name>82</name>
<clade>
<name>72</name>
<clade>
<name>66</name>
<clade>
<name>57</name>
<clade>
<name>Thermodesulfobacteria</name>
</clade>
<clade>
<name>delta/epsilon</name>
</clade>
</clade>
<clade>
<name>Nitrospirae</name>
</clade>
</clade>
<clade>
<name>Acidobacteria</name>
</clade>
</clade>
<clade>
<name>78</name>
<clade>
<name>73</name>
<clade>
<name>67</name>
<clade>
<name>58</name>
<clade>
<name>Betaproteobacteria</name>
</clade>
<clade>
<name>Gammaproteobacteria</name>
</clade>
</clade>
<clade>
<name>Alphaproteobacteria</name>
</clade>
</clade>
<clade>
<name>59</name>
<clade>
<name>Chrysiogenetes</name>
</clade>
<clade>
<name>Deferribacteres</name>
</clade>
</clade>
</clade>
<clade>
<name>Spirochaetes</name>
</clade>
</clade>
</clade>
</clade>
</clade>
<clade>
<name>Cyanobacteria</name>
</clade>
</clade>
</clade>
<clade>
<name>UNSAMPLED</name>
</clade>
</clade>
 </phylogeny>
</spTree><recGeneTree>
<phylogeny rooted="true">
<clade>
<name>38</name>
<eventsRec>
<branchingOut speciesLocation="78"></branchingOut>
</eventsRec>
<clade>
<name>TLFD_1_18_42</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>18</name>
<eventsRec>
<transferBack destinationSpecies="75"></transferBack>
<branchingOut speciesLocation="75"></branchingOut>
</eventsRec>
<clade>
<name>4</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<duplication speciesLocation="UNSAMPLED"></duplication>
</eventsRec>
<clade>
<name>2</name>
<eventsRec>
<duplication speciesLocation="UNSAMPLED"></duplication>
</eventsRec>
<clade>
<name>TLFD_1_0_42</name>
<eventsRec>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Actinobacteria</name>
<eventsRec>
<transferBack destinationSpecies="Actinobacteria"></transferBack>
<leaf speciesLocation="Actinobacteria" geneName="Actinobacteria"></leaf>
</eventsRec>
</clade>
</clade>
<clade>
<name>TLFD_1_1_42</name>
<eventsRec>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Firmicutes</name>
<eventsRec>
<transferBack destinationSpecies="Firmicutes"></transferBack>
<leaf speciesLocation="Firmicutes" geneName="Firmicutes"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
<clade>
<name>TLFD_1_3_42</name>
<eventsRec>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Lentisphaerae</name>
<eventsRec>
<transferBack destinationSpecies="Lentisphaerae"></transferBack>
<leaf speciesLocation="Lentisphaerae" geneName="Lentisphaerae"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
<clade>
<name>17</name>
<eventsRec>
<speciation speciesLocation="75"></speciation>
</eventsRec>
<clade>
<name>7</name>
<eventsRec>
<speciation speciesLocation="48"></speciation>
</eventsRec>
<clade>
<name>Alveolata</name>
<eventsRec>
<leaf speciesLocation="Alveolata" geneName="Alveolata"></leaf>
</eventsRec>
</clade>
<clade>
<name>Stramenopiles</name>
<eventsRec>
<leaf speciesLocation="Stramenopiles" geneName="Stramenopiles"></leaf>
</eventsRec>
</clade>
</clade>
<clade>
<name>16</name>
<eventsRec>
<speciation speciesLocation="69"></speciation>
</eventsRec>
<clade>
<name>12</name>
<eventsRec>
<branchingOut speciesLocation="Glaucocystophyceae"></branchingOut>
</eventsRec>
<clade>
<name>TLFD_1_8_42</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Chloroflexi</name>
<eventsRec>
<transferBack destinationSpecies="Chloroflexi"></transferBack>
<leaf speciesLocation="Chloroflexi" geneName="Chloroflexi"></leaf>
</eventsRec>
</clade>
</clade>
<clade>
<name>11</name>
<eventsRec>
<branchingOut speciesLocation="Glaucocystophyceae"></branchingOut>
</eventsRec>
<clade>
<name>Glaucocystophyceae</name>
<eventsRec>
<leaf speciesLocation="Glaucocystophyceae" geneName="Glaucocystophyceae"></leaf>
</eventsRec>
</clade>
<clade>
<name>TLFD_1_10_42</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Rhodophyta</name>
<eventsRec>
<transferBack destinationSpecies="Rhodophyta"></transferBack>
<leaf speciesLocation="Rhodophyta" geneName="Rhodophyta"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
</clade>
<clade>
<name>SL_1_15_61</name>
<eventsRec>
<speciation speciesLocation="61"></speciation>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="Rhodophyta"></loss>
</eventsRec>
</clade>
<clade>
<name>15</name>
<eventsRec>
<speciation speciesLocation="47"></speciation>
</eventsRec>
<clade>
<name>Chlorophyta</name>
<eventsRec>
<leaf speciesLocation="Chlorophyta" geneName="Chlorophyta"></leaf>
</eventsRec>
</clade>
<clade>
<name>Streptophyta</name>
<eventsRec>
<leaf speciesLocation="Streptophyta" geneName="Streptophyta"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
</clade>
</clade>
</clade>
</clade>
<clade>
<name>37</name>
<eventsRec>
<speciation speciesLocation="78"></speciation>
</eventsRec>
<clade>
<name>35</name>
<eventsRec>
<branchingOut speciesLocation="73"></branchingOut>
</eventsRec>
<clade>
<name>33</name>
<eventsRec>
<branchingOut speciesLocation="73"></branchingOut>
</eventsRec>
<clade>
<name>23</name>
<eventsRec>
<transferBack destinationSpecies="73"></transferBack>
<branchingOut speciesLocation="73"></branchingOut>
</eventsRec>
<clade>
<name>21</name>
<eventsRec>
<speciation speciesLocation="73"></speciation>
</eventsRec>
<clade>
<name>SL_1_19_67</name>
<eventsRec>
<speciation speciesLocation="67"></speciation>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="58"></loss>
</eventsRec>
</clade>
<clade>
<name>Alphaproteobacteria</name>
<eventsRec>
<leaf speciesLocation="Alphaproteobacteria" geneName="Alphaproteobacteria"></leaf>
</eventsRec>
</clade>
</clade>
<clade>
<name>SL_1_20_59</name>
<eventsRec>
<speciation speciesLocation="59"></speciation>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="Deferribacteres"></loss>
</eventsRec>
</clade>
<clade>
<name>Chrysiogenetes</name>
<eventsRec>
<leaf speciesLocation="Chrysiogenetes" geneName="Chrysiogenetes"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
<clade>
<name>TLFD_1_22_42</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>DeinococcusThermus</name>
<eventsRec>
<transferBack destinationSpecies="DeinococcusThermus"></transferBack>
<leaf speciesLocation="DeinococcusThermus" geneName="DeinococcusThermus"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
<clade>
<name>TLFD_1_32_42</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>32</name>
<eventsRec>
<transferBack destinationSpecies="74"></transferBack>
<speciation speciesLocation="74"></speciation>
</eventsRec>
<clade>
<name>Amoebozoa</name>
<eventsRec>
<leaf speciesLocation="Amoebozoa" geneName="Amoebozoa"></leaf>
</eventsRec>
</clade>
<clade>
<name>31</name>
<eventsRec>
<speciation speciesLocation="68"></speciation>
</eventsRec>
<clade>
<name>27</name>
<eventsRec>
<speciation speciesLocation="46"></speciation>
</eventsRec>
<clade>
<name>TLTD_1_25_34</name>
<eventsRec>
<transferBack destinationSpecies="Rotosphaerida"></transferBack>
<branchingOut speciesLocation="Rotosphaerida"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="Rotosphaerida"></loss>
</eventsRec>
</clade>
<clade>
<name>TLFD_2_25_42</name>
<eventsRec>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Discoba</name>
<eventsRec>
<transferBack destinationSpecies="Discoba"></transferBack>
<leaf speciesLocation="Discoba" geneName="Discoba"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
<clade>
<name>Fungi</name>
<eventsRec>
<leaf speciesLocation="Fungi" geneName="Fungi"></leaf>
</eventsRec>
</clade>
</clade>
<clade>
<name>30</name>
<eventsRec>
<speciation speciesLocation="60"></speciation>
</eventsRec>
<clade>
<name>Filasterea</name>
<eventsRec>
<leaf speciesLocation="Filasterea" geneName="Filasterea"></leaf>
</eventsRec>
</clade>
<clade>
<name>SL_1_29_45</name>
<eventsRec>
<speciation speciesLocation="45"></speciation>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="Choanoflagellata"></loss>
</eventsRec>
</clade>
<clade>
<name>Metazoa</name>
<eventsRec>
<leaf speciesLocation="Metazoa" geneName="Metazoa"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
</clade>
</clade>
</clade>
</clade>
<clade>
<name>TLFD_1_34_42</name>
<eventsRec>
<transferBack destinationSpecies="UNSAMPLED"></transferBack>
<branchingOut speciesLocation="UNSAMPLED"></branchingOut>
</eventsRec>
<clade>
<name>LOST</name>
<eventsRec>
<loss speciesLocation="UNSAMPLED"></loss>
</eventsRec>
</clade>
<clade>
<name>Chlamydiae</name>
<eventsRec>
<transferBack destinationSpecies="Chlamydiae"></transferBack>
<leaf speciesLocation="Chlamydiae" geneName="Chlamydiae"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
<clade>
<name>Spirochaetes</name>
<eventsRec>
<leaf speciesLocation="Spirochaetes" geneName="Spirochaetes"></leaf>
</eventsRec>
</clade>
</clade>
</clade>
</phylogeny>
</recGeneTree>
</recPhylo>
