SpaceTravLR · Run Summary (example)

AnnData /data/kidney_visium/processed.h5ad

Beta outputs /outputs/kidney_run/*_betadata.feather

Report /outputs/kidney_run/spacetravlr_run_summary.html

Overview

Cells (obs)

12,847

in report AnnData

Genes (vars)

18,632

expression matrix

Betadata files

412

matching *_betadata.feather

Spatial / UMAP figures are not generated here; use scanpy or your notebook on the same .h5ad if needed. Clusters in the table use leiden; spatial key detected: spatial.

AnnData

⬡ summary

Shape (obs × vars)	12,847 × 18,632
Cluster key (obs)	leiden
Unique clusters	24
Spatial obsm key	spatial
UMAP present	yes (obsm['X_umap'])

Training (config / manifest)

⚙ run

training.mode / manifest	hybrid
training.epochs	80
execution.n_parallel	8
data.layer	counts
data.cluster_annot	leiden
spatial coords	adata.obsm['spatial']
betadata files (*_betadata.feather)	412